Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2117 ATGAGGCCTAATGTTAAATTGTTGATAGATTGTGGAGTTTCTGATTCGAACATTGTAATGTTGCTTCGTAAATGGCCTAGTATATTCTCCTCAATTCAGTTGCTTAAAGAGGTTGAGGAAGTGAAGGGGTTGGGTTTTGACCCTTCAAAATCAAGTTTTAGTACAGCGTTGCTGGCCAAACATACTGTCAGAAATTCGCATTGGGATGAGAAAGTTGATGTTTTTAAGAGTTGGGGTTGGTCTGATGAAACTGTTCTTGAAGCATTTAGGAGGCAGCCTAATTGTATGTTAGCATCATGTGATAAAATCAATGCTATGATGGGTTTTTGGGTGGGCGAGTTGGGTTGGGATGCTCTGGCACTTGTGAAAGGAACTAATTTTTTTGGGTTTAGTTTGCAGAAAAGGATCATTCCTAGGGCTTTGATTGTCCGGTATCTACTTGCAAAAGGTTTGATAGATAAGGATGCTAGCTTATTTACACCGTTCATAATTTCGGAGAAGATGTTCCTGCAGAAGTTTGTGTAG 525 0.3962 MRPNVKLLIDCGVSDSNIVMLLRKWPSIFSSIQLLKEVEEVKGLGFDPSKSSFSTALLAKHTVRNSHWDEKVDVFKSWGWSDETVLEAFRRQPNCMLASCDKINAMMGFWVGELGWDALALVKGTNFFGFSLQKRIIPRALIVRYLLAKGLIDKDASLFTPFIISEKMFLQKFV* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2117 174 Gene3D Transcription termination factor 3, mitochondrial 1 174 IPR038538 -
Apr1g2117 174 PANTHER CGI-12 PROTEIN-RELATED 3 174 IPR003690 GO:0003690|GO:0006355
Apr1g2117 174 Pfam mTERF 3 169 IPR003690 GO:0003690|GO:0006355
Apr1g2117 174 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 3 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2117 Apr-Chr1 30644541 30645065 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr1g2117 mTERF 2.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2117 K15032 - aprc:113852255 353.599