Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2095 ATGAATACATCAAAAAACCCTATTGATGAAAACACTGAGGCTGAGGGTAAAGCTTCCTCTCCCCACTCAACAACGTTGAAGCTATTTGGTTTTCCACTAACTCCACCATGCTATGAAGAGAACACCAACACCACTCCTTGTTGCACATACAAGAGATTCAAATGCCAATTTTGTTACCGTGAATTCGCCAATTCTCAAGCACTAGGTGGCCACCAAAATGCGCACAAGAGAGAACGCCAAAGCGCTGCTTTCTCACCCGTCTCTCACTTTCATCAACGCTTCACACCACCTCCTCGTAACCCTATCATAGTTCCACACGGAAGATCAGGACCATCCGTTCGTCCACGTGGCCATCATCATGAACCTTGGCTCCGAAATGATGCATGGTTAGACACCGAGGGACCTCATCATCTTCGTTTTGTGAGACCAATGGGTGCAACCACAGCTACAAAAGAGTCTTTCATACGAGTACGGAATGTTGATGACGATGTTGATCTCAACTTGAGTTTAGCAAGCAATAGCACACCCCCCAACTCCAAGGGCAAGGAGTTGGCCAGGTGGAAAATTTGA 570 0.4667 MNTSKNPIDENTEAEGKASSPHSTTLKLFGFPLTPPCYEENTNTTPCCTYKRFKCQFCYREFANSQALGGHQNAHKRERQSAAFSPVSHFHQRFTPPPRNPIIVPHGRSGPSVRPRGHHHEPWLRNDAWLDTEGPHHLRFVRPMGATTATKESFIRVRNVDDDVDLNLSLASNSTPPNSKGKELARWKI* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2095 189 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Apr1g2095 189 PANTHER ZINC FINGER PROTEIN 5 12 173 IPR044299 GO:0010090
Apr1g2095 189 SUPERFAMILY beta-beta-alpha zinc fingers 51 80 IPR036236 -
Apr1g2095 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
Apr1g2095 189 MobiDBLite consensus disorder prediction 1 23 - -
Apr1g2095 189 PANTHER ZINC FINGER PROTEIN 8-LIKE 12 173 - -
Apr1g2095 189 MobiDBLite consensus disorder prediction 72 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2095 Apr-Chr1 30503975 30504544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2095 23 80 C2H2 Transcription Factor Family AT1G67030 48.438 6.49e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2095 - - aprc:113852247 400.979