Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2094 ATGGGAGTTGAAAAAGAAGGGACCAGAAGTGGGTTTTTCCATTTGTTTGACTGGACCTCGAAATCCCGGAAGAAATTATTTGCAACCAAATCAGATTTACCAGATCCTTTAAAACAGGGAAGAAAAGTAGATTACAATGTGGCAATGGCACAGCCCTATCTGGTGGATGAAGATGAAAATGGATTAGGGGCAAGTGTTCGAGGAAGCTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAGCATGTGGGACAAGGGCCCCTAGTGTTGTTGCCAGGCTTATGGGATTAGATTCCTTGCCTACTTCTAATTTTTCTGATCCTTATTCTACCCCATATTTTGATATGCGATCCCTTCAAGAGACACAGTGTTTAAGAAAAAACCTCAGTCACCAACATGAACATCAGTCCCCATATTCTACCAAGCTGGTTGAAAAGGTTGAGGGCTCTTCTAGGAACTTCATGGAACCAAAGCCTCAGAAGACCATTAGCAGGCCAATTGAAAAGTTCCAAACAGAAGTATTACCTCCAAAATCAGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCAATCAAGAGTCCTAGCTTTGTTCCAACCAATAATGCTGCTTATATAATGGAGGCTGCAGCAAGAATTATTGACCCTAGAATCCAGGCTACTACAAAGGCTAAGACACCTATGGTAGGATCATCAACCATGTCATTGAGAGTTAGAGATCTTAAAGATAAGGTGGAGGCTTCACGAAAAGGACCTCTAATTGGGCCATCCTCCATGACTTCTAGAGCACGAGATCTAAAAGAGAAAAAAGAATTTGCTCAAAAGACAGCCAGGCTTTCAGAACCTTCTCAAAGATCAGTTGAGTCAAATGCTGCTAAGTATCTCAAAGGCCAATCTTTGAACAGAAGCTGGAATGGATCTGTGGATACATCCATCAAATCTCCTAAACATGAGCAAGAAGATTCTTCTTTGAAGAATAAGGGGAAGTCCATTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTTGACAGGTGGCAGAAGTTTGATGGGCCAAGAGCATCTTGATGTTAAATCCAACCAACCAATGAAGGCAAATGTTCAGAAAAATTTGCATAAGAAATCTTCCGGTGCCCTCAGACAGAATAATCTGAAACAAAATTATTCATTTGAAAAAGAAAAATTACCATCAAAGCCATTGGTTACCAATTCCCACAGTAGGAAAGTTTTGACTGGGGATTCTTCTTATGGACGTCATAGAAGCTCTAGTAATAAATCCAGCGCAAAATCTAAAGTTGGATCCAGAAAGTCAGCCATGGAAGTGACAGATAGTGAAAAGGAAGTTTTGTATACCAGCACAAACAGTTTTCCTAGGAAGAAAAGGTCTACAGACAAGGACTGGAATGATAGGGTTGTGGATAATTTGTTCATTGAAAAAACTCAGAAGCCAGTTAAGTCTAATCTAGTGAGTAATAAACAATATAGTTTGGCTGAAGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCACACCATTAACTAGGGGGAGTCCAGGTTTTGAGTCATCTGGACAAGCTGGCCAGAATGCTAATGGTCTTTCCTTGGATCAACGTATTAAAAGAGTGTTGCTTGACACTGAAAATACAAGGTCTCCAATAGGATACAATGTGATTGGTGGTGACGCCTTAGGTATCCTTTTGGAACAGAAATTGAGGGAGTTAACACGTAGTGCAGAAACTGCATGCCATGACTCTTCTAAAGTGAGACAACCTTCCATTACTTCACCAATGTCAAATGATCAAGTAACCAGCCTTAATTTAGTTAACCTCAATCCAAGGTTACAACAGAAGAAAGACCAAGATGTGTTATTTACGGACAAGTTAAGCAGTAGCGGTGATTCAGACATCTCCTTCACTGGTCCCCCTGAATTATCACTGAAACATAACTCATGGGTTGACGAGATAGAACCACAGTTATTCAATTGTCGACACCCAAGTCCAATATCTGTTCTTGAGCCTTCTTTTTCAATTGAAAGCTGTGAATCTTCAATGAGCACAGATGTTACTAGTACAGAAGGAAGCAAGTTGTGGTCATCTGTTCAAGCTCAAGAAGTTAATCGCTTAAATTTTTCAAGAAAGTTCTATCCTTGTGAATCTGATGCAGAGTTATCTGATTCAGCTTCTTCAACATCAGCTGGCACCATGTTGAAGAAGCACGCAAGCGCATCTTCTGTCATGAAGTTTAGAAGCTCAAGCACATGGGAGTTGGACTATGTGAAAGATATATTGTGTAATGTTGAATTGATGTATATGGAGTTTTCCCTTGGTCGAGCTCATGAGGTTGTAAACTCTCATCTATTCGACCACTTAGAAAGTCAAAAGGGAAGGTTCAAGAGTGACGATCAATCCAGGGTAAGAAGGAAAGCTACATTTGATTGTGTGAGTGAATGTTTGGATTTAAGAAGCCGGTGTTATGTGGGGGGAGGATACACAATGTGGAGCAAAGGGTTTGAAATGGTGAAAAGAAATGAATGGTTGGCAGAAGATGTGTACAAGGAGATTTCAGGTTGGAGTGGCATGGGGGATTCAATGGTAGATGAGCTTGTGGACAAGGACATGAGCAGCCAATATGGAAGATGGCTCGAATACGAGGTTGATGCTTTTGAACTTGGATCAGAGGTTGTGGACCAAATATTTGATTCTTTGGTTGATGATGTTGTCACTCAGATCTTGCAATTGTAA 2778 0.4028 MGVEKEGTRSGFFHLFDWTSKSRKKLFATKSDLPDPLKQGRKVDYNVAMAQPYLVDEDENGLGASVRGSCDHSYASSVTDDEACGTRAPSVVARLMGLDSLPTSNFSDPYSTPYFDMRSLQETQCLRKNLSHQHEHQSPYSTKLVEKVEGSSRNFMEPKPQKTISRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKSPSFVPTNNAAYIMEAAARIIDPRIQATTKAKTPMVGSSTMSLRVRDLKDKVEASRKGPLIGPSSMTSRARDLKEKKEFAQKTARLSEPSQRSVESNAAKYLKGQSLNRSWNGSVDTSIKSPKHEQEDSSLKNKGKSISLAIQAKVNVQRREGLSLTGGRSLMGQEHLDVKSNQPMKANVQKNLHKKSSGALRQNNLKQNYSFEKEKLPSKPLVTNSHSRKVLTGDSSYGRHRSSSNKSSAKSKVGSRKSAMEVTDSEKEVLYTSTNSFPRKKRSTDKDWNDRVVDNLFIEKTQKPVKSNLVSNKQYSLAEEVKKKDMDVVSFTFTTPLTRGSPGFESSGQAGQNANGLSLDQRIKRVLLDTENTRSPIGYNVIGGDALGILLEQKLRELTRSAETACHDSSKVRQPSITSPMSNDQVTSLNLVNLNPRLQQKKDQDVLFTDKLSSSGDSDISFTGPPELSLKHNSWVDEIEPQLFNCRHPSPISVLEPSFSIESCESSMSTDVTSTEGSKLWSSVQAQEVNRLNFSRKFYPCESDAELSDSASSTSAGTMLKKHASASSVMKFRSSSTWELDYVKDILCNVELMYMEFSLGRAHEVVNSHLFDHLESQKGRFKSDDQSRVRRKATFDCVSECLDLRSRCYVGGGYTMWSKGFEMVKRNEWLAEDVYKEISGWSGMGDSMVDELVDKDMSSQYGRWLEYEVDAFELGSEVVDQIFDSLVDDVVTQILQL* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2094 925 PANTHER EXPRESSED PROTEIN 1 923 - -
Apr1g2094 925 Pfam Domain of unknown function (DUF4378) 767 917 IPR025486 -
Apr1g2094 925 MobiDBLite consensus disorder prediction 306 330 - -
Apr1g2094 925 MobiDBLite consensus disorder prediction 243 270 - -
Apr1g2094 925 MobiDBLite consensus disorder prediction 408 442 - -
Apr1g2094 925 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 923 - -
Apr1g2094 925 MobiDBLite consensus disorder prediction 401 454 - -
Apr1g2094 925 Pfam DUF761-associated sequence motif 76 107 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2094 Apr-Chr1 30484006 30487899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2094 3 923 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.351 1.74e-88 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2094 - - gmx:102669513 1474.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2094 1 30484006 30487899 Apr1g2094 1 30484006 30487899 ECH
Apr9g2287 9 30592845 30596521 Apr1g2094 1 30484006 30487899 PCT