Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2086 ATGGCAAAGTCGAAGAACCACACAGCTCATAACCAATCCTACAAGGCCCACAAAAATGGCATCAAGAAACCTAAGAGGCATCGCCACAGTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAACCAGAGGTACGCGAGGAAGCACAACAAGAAGAGTGGTGAAACAGCCACAGAAGAGTAG 183 0.4863 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHSSTKGMDPKFLRNQRYARKHNKKSGETATEE* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2086 60 MobiDBLite consensus disorder prediction 1 32 - -
Apr1g2086 60 PANTHER 60S RIBOSOMAL PROTEIN L29 1 60 - -
Apr1g2086 60 MobiDBLite consensus disorder prediction 1 60 - -
Apr1g2086 60 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Apr1g2086 60 Gene3D - 1 60 - -
Apr1g2086 60 PANTHER 60S RIBOSOMAL PROTEIN L29 1 60 IPR002673 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2086 Apr-Chr1 30401379 30402089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2086 1 60 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 83.333 1.50e-32 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2086 K02905 - gmx:100803210 128.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2086 1 30401379 30402089 Apr1g2086 1 30401379 30402089 ECH
Apr9g2297 9 30671262 30671939 Apr1g2086 1 30401379 30402089 PCT