Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2072 ATGGAAGACTCGTATCATTTCAGTGAGTTCAGTTTCAATGCTATTGAAGACAATTCGAGTTCATCCAACGATATATTCTGGGCTACTGAGGGACTAAATGAAGTGAAAATGGTTAAATTTTCAGGAGCAGAACATTGGGGAGAATCAAGGGGAATTGACTCACTTTGTTCTAATTTTGGGTTCTTCCCAGATGGTCCATCAGAAGAAGGGTACCTTCTATCCACTAATGAACAAAATTATCATCTTCAACCATCATATCATGATTATTCTCAATTTGATAACCTACACTTTGACATGGTATCTTCACCACTCCAATTTCATAAACAATATCAACCCATGGCTTCACTTTGTCACCCAAAAAAGGAAAAGCCACACTCAACTACTTCTTTAGCTTCACTAGAGATTTTGAAGAACTATGGAAAGGGCTTCAGGAGGTTATGTAATGAAGGGAAGAAAACCCTTCAGCCAGTTGATGGTTTGGTTGCAGTCACAAATGAGAAAAAGCTCTCAACTGAAGACGTTATGAAGGTAGCTGGAACAAGGTTCATTCAATCTTCATCTTCAGAGTCACAAGAAGGTTTTAAATTCTTGGACACTCACCCTTTTGGTTTTTCTTTCTCTGGTCTCTCTGATGAAGAGAAAGAGGATGTGGCACTTGCTGAGTCCCTCTTGGCTTCTGCTGAGAAAGTTGGGTATCAACAATTTGAGCGTGCTAGCAAATTGCTGAGTCATTGTGAATCATTGGCTTCCAAGACTGGGAACCCTGTTAAGCGTGTGGTTCATTATTTTGCTGAAGCACTTCGCCAGAGAATAGATAGAGAAACAGGAAGAGTTTCATCGAAAGATTTACAAAAACTTGAGTTATTTGATCCTGAAAAGGCAGCTAAGGAACTAAACCCAACTATTGTTGCATTTTATGAAGATCTTCCTTTTTGTCAAATTGCAGTGTTCACTTCAATCCAAGCTATAATAGACAATGTAGCTGATGCAAAAAAGATTCATGTTATTGATCTTGAAATCAGAAAGGGTGGCCAATGGACAATCCTAATGAAAGCCCTTGAGTCAAGACATGAATGTCCAATTGAGCTTCTAAAGATAACAGCTGTTGAAAGTGGAACCACTTCAAAACATATAGTTGAGGACACTGGTAAGAGATTGAAGGATTTTGCACAATGCTTGAACATACCCTTCTATTTCAATGTAGTTATGGTACCAGACATGTTGCATCTTAAAGAAGAGCAGTTTGACATAGATCCTGAGGAAACAATTGCAGTTTACTCTCAGTGTGCACTTAGAATCAATATTCAACATTCAAAGCAGCTTGAAACCCTCATGAGGGTGATTAGAACCATAAATCCTAATGTGATGGTGGTAATTGAAATTGAAGCAAACCACAATTCTACATCTTTTGTGAACCGTTTCATTGAGGCCCTTTTCTTCTTTAGTGCATTTTTTGATTGTCTTGAGACTTGTATGAAAGGGGATGAGAAAAACCGAATGATTATGGAGTCAATGTACTTCAATCATGGAATCAGGAATATTGTGGCCGAAGAAGGAGAAGAAAGAAAGACCAGAAATGTGAAGGTTGATGTGTGGAGGGCCTTTTTCTCACGCTATGGAATGGTGGAGACAGAGTTGAGCTCTTTATCTTTATACCAAGCAGATTTGGTTGCTAAAAGATTTCCCTGTGCAAGGTTTTGCACACTCAATATGAATGGGCGTTGCCTTCTTATTGGATGGAAAGGAACACCAATTAGCTCTGTCTCTGTTTGGAAATTCCTTTGA 1785 0.3877 MEDSYHFSEFSFNAIEDNSSSSNDIFWATEGLNEVKMVKFSGAEHWGESRGIDSLCSNFGFFPDGPSEEGYLLSTNEQNYHLQPSYHDYSQFDNLHFDMVSSPLQFHKQYQPMASLCHPKKEKPHSTTSLASLEILKNYGKGFRRLCNEGKKTLQPVDGLVAVTNEKKLSTEDVMKVAGTRFIQSSSSESQEGFKFLDTHPFGFSFSGLSDEEKEDVALAESLLASAEKVGYQQFERASKLLSHCESLASKTGNPVKRVVHYFAEALRQRIDRETGRVSSKDLQKLELFDPEKAAKELNPTIVAFYEDLPFCQIAVFTSIQAIIDNVADAKKIHVIDLEIRKGGQWTILMKALESRHECPIELLKITAVESGTTSKHIVEDTGKRLKDFAQCLNIPFYFNVVMVPDMLHLKEEQFDIDPEETIAVYSQCALRINIQHSKQLETLMRVIRTINPNVMVVIEIEANHNSTSFVNRFIEALFFFSAFFDCLETCMKGDEKNRMIMESMYFNHGIRNIVAEEGEERKTRNVKVDVWRAFFSRYGMVETELSSLSLYQADLVAKRFPCARFCTLNMNGRCLLIGWKGTPISSVSVWKFL* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2072 594 ProSiteProfiles GRAS family profile. 210 592 IPR005202 -
Apr1g2072 594 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 592 IPR005202 -
Apr1g2072 594 Pfam GRAS domain family 220 592 IPR005202 -
Apr1g2072 594 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 43 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2072 Apr-Chr1 30188168 30189952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2072 211 593 GRAS Transcription Factor Family AT1G66350 31.771 8.42e-58 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr1g2072 GRAS 3.7e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2072 - - gmx:100798926 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2072 1 30188168 30189952 Apr1g2072 1 30188168 30189952 ECH