Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2068 ATGGATACCCAGCACGAACTCATAATAGTAAAGGTATGTGAAATCTACGAAAAAATCTCCAAATTAGAAAAACTAAACCCCTCCAAACGTGTCAATGACCTCTTTACCAAACTTGTAACGCTTTGCACTTCCCCTTGTGAATTAGATGTTACTCAACTGAGCCAAGAAGTTAGAGAAACTACGGCTAAACTCATTAGACTTTGTGGGAAAGCCGAGGGACTTCTTGAAACCCATTACTCAACTCTCATAGGATCACATGAGAACCCCCTAAACCACATGAAACTCTTCCCTTACTACTCCAACTACCTCAAACTCACCCACTTGGAATTCACCATGCTCACCAAACACTGCACCCAAGTCCCCACCCAACTCGCCTTTGTTGGCTCTGGTCCTCTTCCTCTTACCACGATCATGTTGGCGACCCATTACCTTAAGCACACATGCTTTCACAACTACGACATGGATCCATTAGCAAATGCCAAAGCCTATGACTTGGTCTCATCAGATCCCGACTTGTCAAAAAGATTGTTCTTCCACACTAGTGATATTGTGAATGTGACAAGTGGTCTTAAGGAGTACAACGTTGTCTTTTTAGCAGCACTAGTGGGCATGGACAAAAAGGAGAAAGCAAAAGTGATCAATCACTTGGCTAAACACATGGGTCATGGAGCAATTCTGTTGCTGAGGAGTGCACATGGAGCACGAGCTTTCCTCTATCCTGTGGTTGATGTTTCTGATCTCAAAGGTTTTGATGTTCTGTCGGTTTTTCACCCAACTGATGAGGTCGTTAATTCAGTTATTGTTGCACGAAAGCGTTCGGTGAATCATGGGCTTTACCCACCAGTGCTGGCTAGCAAATGCTCTGAAGTTGAAGGATTTAACCCCTTAAATCATGGCAATGTTATTGAGGAGTTGACCGTTGACGAGCAGGCTTGA 936 0.438 MDTQHELIIVKVCEIYEKISKLEKLNPSKRVNDLFTKLVTLCTSPCELDVTQLSQEVRETTAKLIRLCGKAEGLLETHYSTLIGSHENPLNHMKLFPYYSNYLKLTHLEFTMLTKHCTQVPTQLAFVGSGPLPLTTIMLATHYLKHTCFHNYDMDPLANAKAYDLVSSDPDLSKRLFFHTSDIVNVTSGLKEYNVVFLAALVGMDKKEKAKVINHLAKHMGHGAILLLRSAHGARAFLYPVVDVSDLKGFDVLSVFHPTDEVVNSVIVARKRSVNHGLYPPVLASKCSEVEGFNPLNHGNVIEELTVDEQA* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2068 311 PANTHER NICOTIANAMINE SYNTHASE 1 311 - -
Apr1g2068 311 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Apr1g2068 311 Pfam Nicotianamine synthase protein 3 274 IPR004298 GO:0030410|GO:0030418
Apr1g2068 311 PANTHER NICOTIANAMINE SYNTHASE 3 1 311 IPR004298 GO:0030410|GO:0030418
Apr1g2068 311 Gene3D Vaccinia Virus protein VP39 8 273 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2068 Apr-Chr1 30173083 30174018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2068 1 309 Nicotianamine Synthase Gene Family AT5G04950 52.500 4.89e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2068 K05953 - gmx:100814069 504.212