Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2065 ATGGTTGACCGTAAAAACAGCAAGGTTGTTATAAGAGAATTTAATGAAGATATAGATGTTAAAATGGTGAGAAAGCTTGAGAGGAACTGTGAGATTGGGACTAAAAAGTTGGTCTCCATTTTCACCAACATGATGAGTGACCCTTTATCTAGGATTAGGCTCTACCCCCTTCATGTTATGCTGGTAGCCGAGCTTCTTGAAAGCAGGGAACTTGTTGGAGTGATTCGGGGTTGCATCAAGAGGGTGGGGACTCTTTCTGGATCACTCTTGAAGATGGGTTGCATCCTAGGCCTCAGGGTGTCTCCTACTTATAGGAGAAAAGGGGTTGCACTAAAACTTGTCACAGCAGTTGAAGAATGGATGGTAAGAAATGGAGCTGAGTACGCACTCCTAGCCACTGAAAAGAATAATGATGCCTCTAAAAACCTATTTACCACCAAATGCAACTATGTGAATCTCAGCTCACTTGTTATATTTGTCCATCCAACTAGTTCCCTTACAAAGAACATTTCCACAAGGGATGTAATAATAGAGAAAGTGGACATAGATCAAGCAATTTTGTTATATAGAAGAACCTTGAGGGCCAAAGATTTGTATCCATTAGACATGGACATTATTCTAAAGGAGAAGCTCAGCTTAGGCACATGGGTAAGTTATTTCAAAGAAGAGGGCTGGCTCAACTTGTTGAATAAGGTACGTAGTGAAGATAGTATTATTAGCAAAACCTCAAGCTCATGGATCATTTTTAGTATATGGAACAATTGTGATTATGAAGCTTATAAACTTGAAGTTAGAAAGTCTCAGCCACTAAGGTTTCTTCATACAACTTTAAATCATGCAAGAGAGAAAATTTCCCCTTGTCTCAGAATGTTGGCGAGTGGCTCACTATGTAGATCCTTTGGGTTTCTCTTCCTCTATGGACTCCATGGAGAGGGAGAGAACCTTGGGGAGCTTATGGAGTCTATATGGAGATTCACATCAAGAATGGGAGAAGGTATGAAGGACTGTAGTGTGGTTATAACTGAGTTAGGGTTCGGCGATCCACTGGCCAGCCATGTTCCTCAGACAACTTCTATGTCATGTATTGATGATCTCTGGTACACAAAGAGACTTTCAAGCCACGGCGATGAAATGGTGATGAAGGGAGAAGTGGGAAATGTGTTCGTTGACCCTAGGGATTTTTAG 1185 0.4118 MVDRKNSKVVIREFNEDIDVKMVRKLERNCEIGTKKLVSIFTNMMSDPLSRIRLYPLHVMLVAELLESRELVGVIRGCIKRVGTLSGSLLKMGCILGLRVSPTYRRKGVALKLVTAVEEWMVRNGAEYALLATEKNNDASKNLFTTKCNYVNLSSLVIFVHPTSSLTKNISTRDVIIEKVDIDQAILLYRRTLRAKDLYPLDMDIILKEKLSLGTWVSYFKEEGWLNLLNKVRSEDSIISKTSSSWIIFSIWNNCDYEAYKLEVRKSQPLRFLHTTLNHAREKISPCLRMLASGSLCRSFGFLFLYGLHGEGENLGELMESIWRFTSRMGEGMKDCSVVITELGFGDPLASHVPQTTSMSCIDDLWYTKRLSSHGDEMVMKGEVGNVFVDPRDF* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2065 394 Gene3D - 11 162 - -
Apr1g2065 394 CDD NAT_SF 60 131 - -
Apr1g2065 394 Pfam Acetyltransferase (GNAT) family 63 150 IPR000182 GO:0016407
Apr1g2065 394 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 212 IPR000182 GO:0016407
Apr1g2065 394 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 1 394 - -
Apr1g2065 394 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 6 151 IPR016181 -
Apr1g2065 394 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2065 Apr-Chr1 30144044 30145599 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Apr1g2065 Acetyltransf_1 4.4e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2065 - - gmx:100808694 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2065 1 30144044 30145599 Apr1g2065 1 30144044 30145599 ECH
Apr9g2310 9 30773927 30775509 Apr1g2065 1 30144044 30145599 PCT