Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr1g2060 | ATGGCGTCTGCAAGTGGAGCAGCGAATTCCTCAATTCCGACGCAAATTCACAGTTCGAGAACGAAGCGAAGCCACCACAGCATCGATTCGATGAGCAAAGCGATAGCGCAGTACACAGAAGATGCGAGGCTCCACGCCGTGTTCGAACAATCCGGCGAGTCAGGAAAATCCTTTGACTATTCACAATCGCTTCGTGTCACGTCGGAATCGGTGCCGGAGCAGCAAATAACCGCTTACCTTCTCAAAATCCAGCGTGGCGGTTTTATCCAACCATTCGGTTCCATGATCGCCGTCGACGAACGCTCCTTTCGCATCCTCGCCTACTCCGAAAACGCTCGCGACATGCTCGGAATTACTCCTCAGTCCGTTCCCTCTCTCGACGACGACAAGCTCGAACCCTTCGCTCTCGCCACCGATGTTCGCTCTCTCTTCACTCCGTCCAGCGCGTTGCTTCTCGAGAAGGCTTTCACCGCGCGTGAAATTAGCCTCATGAACCCTATTTGGATCCATTCTAGAACCTCCGGTAAGCCTTTCTATGGTATCCTTCACCGAATTGACGTTGGTATTGTCATTGATTTGGAACCTGCGCGTACGGAAGATCCTGCACTTTCCATTGCAGGTGCGGTGCAGTCGCAGAAGCTTGCGGTTCGCGCCATTTCGCAGCTTCAGTCTCTTCCTGGAGGAGATGTTAAGCTTCTTTGTGACACTGTTGTTGAGAGTGTTAGGGAATTGACAGGGTATGATAGGGTTATGGTGTATAGGTTTCATGAGGATGAGCATGGTGAGGTTGTTGCTGAGAGTAAGAGGCCTGATTTGGAGCCTTATATTGGTTTGCATTATCCTGCTACTGATATTCCTCAAGCTTCGAGGTTTTTGTTTAAGCAGAATAGGGTTAGGATGATTGTGGATTGTCATGCTTCGCCTGTGAGGGTGGTTCAGGATGAGGCTCTTGTGCAGCCTCTGTGTTTGGTTGGGTCTACGCTTCGTGCTCCACACGGTTGTCATGCTCAGTACATGGCAAATATGGGGTCGATTGCTTCGTTGGTTATGGCTGTTATTATTAATGGGAATGATGAGGAAGGTGTTGGAGGTCGGAGTTCCATGAGGCTTTGGGGGCTTGTTGTTTGTCATCATACTTCTGCTAGGTGTATTCCTTTTCCCTTGAGGTATGCTTGTGAGTTCTTGATGCAGGCGTTTGGGCTGCAGTTGAATATGGAGCTTCAGTTGGCAGCGCAGTCATTGGAGAAACGGGTTTTGAGAACGCAGACGCTCTTGTGTGACATGCTTCTTAGGGACTCTCCTACTGGCATTGTTACTCAGACTCCTAGTATTATGGACTTGGTCAAGTGTGATGGAGCTGCTCTTTACTACCAAGGAAATTACTGCCCGTTGGGTGTCACCCCGACAGAGTCTCAGATAAGGGATATCATTGAGTGGCTGTTGGCCTTCCATGGAGATTCGACGGGTTTGAGTACTGATAGTCTGGCTGATGCTGGCTATCCTGGGGCTGCCTCGCTAGGGGATGCAGTTTGTGGGATGGCTGTTGCTTATATCACGGAAAAGGATTTTCTTTTCTGGTTTCGGTCCCACACAGCAAAAGAGATCAAATGGGGTGGGGCAAAGCATCACCCAGAGGACAAGGATGATGGGCAGCGAATGCATCCTCGTTCTTCGTTCAAGGCTTTTTTAGAAGTGGTAAAAAGCCGTAGTTTGCCGTGGGAGAATGCAGAAATGGATGCTATTCACTCTTTGCAGCTTATTCTGCGTGACTCATTTAAGGATGCTGAGCAAAGCAATTCTAAGGCTGTTGTGCATTCCCATTTGGTGGAACTAGAGTTGCAAGGGGTAGATGAACTAAGCTCGGTGGCCAGAGAGATGGTTAGGTTGATAGAAACAGCCACTGCTCCCATATTTGCTGTTGATTTTGATGGCAACATAAATGGGTGGAATGCAAAGGTTTCAGAATTGACAGGACTCCCAGTTGAGGATGCTATGGGGAAGTCCTTGGTCCACGATCTTGTGTTCAAGGAGTCTGAAGAAACAGTGGGCAAGCTTCTTTCTCGTGCTTTAAAAGGTGAAGAAGATAAGAATGTTGAGATAAAAATGAGGACGTTTGGCCCAGAACATCAAAATAAGGCAGTTTTTGTAGTGGTGAATGCTTGCTCCAGCAAAGATTATACAAATAATATAGTTGGAGTGTGCTTTGTTGGTCAGGATGTTACTAGTCAAAAAATTGTGATGGACAAATTCATCAACATACAGGGTGACTACAAGGCTATTATACATAGTCCAAATCCATTGATCCCTCCCATTTTTGCATCGGATGATAACACATGTTGCTTAGAGTGGAACACTGCCATGGAAAAGCTAACTGGTTGGGGTCGTGTGGATGTCATTGGAAAAATGTTGGTGGGAGAGGTTTTTGGTAGTTGCTGTCAGTTGAAGGGTTCAGATGCAATAACAAAGTTCATGATTGTCTTGCATAATGCGCATGGGGGACAAGATACTGATAAATTCCCTTTTTCATTTCTCGACCGTCATGGAAAGTATATACAAACTTTCCTGACTGCAAATAAGAGGGTTAACATGGATGGCCAGATCATTGGTGCTTTTTGCTTTTTGCAAGTTGTGACTCCTGAACTTCAACATGCACTAAAGGCCCAGAGACAACAAGAAAAGAATTGCTTTGCTAGGATGAAAGAGTTAGCTTATATTTGTCAAGAAGTAAAGAATCCTTTGAGTGGCATACGCTTTACAAACTCTCTTTTGGAGGCTACAGGCTTGACCGATGAGCAAAAGCAGTTTCTTGAGACTAGTGCTGCTTGTGAGAAGCAAATGTTAAAGATAATACGTGACGTTGATCTTGAAAGAATCGAAGATGGGTCCCTGGAGCTTGAAAAGGGTGAATTCATGCTTGGAAATGTCATAAATGCAGTTGTTAGCCAAGTAATGTTATTGCTAAGAGAAAGAAATTTACAGTTGATTCGTGATATTCCTGAAGAAATCAAGACATTAGCTGTTTATGGTGATCAATTGAGGATTCAACAAATTTTGGCTGATTTCTTATTGAATATGGTGCGCTATGCACCATCTCCAGACGGCTGGGTAGAGATTCATGTACGTCCAAGAATAAAACAAATTTCAGATGGGCTCACCCTTCTCCATGCTGAATTTAGGATGGTATGTCCAGGTGAAGGTCTTCCTCCTGAATTGGTTCAAGACATGTTCCATAACAGTCGGTGGGCGACTCAAGAAGGCTTAGGGCTGAGCATGAGCAGGAAGATTCTAAAGTTAATGAACGGTGAAGTCCAATATATCAGGGAGGCAGAACGTTGCTACTTCTTTGTTCTTCTTGAACTACCCTTGACACGGAAAAGCTCTAAAAAATGTTAA | 3393 | 0.4548 | MASASGAANSSIPTQIHSSRTKRSHHSIDSMSKAIAQYTEDARLHAVFEQSGESGKSFDYSQSLRVTSESVPEQQITAYLLKIQRGGFIQPFGSMIAVDERSFRILAYSENARDMLGITPQSVPSLDDDKLEPFALATDVRSLFTPSSALLLEKAFTAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDEALVQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQTPSIMDLVKCDGAALYYQGNYCPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEQSNSKAVVHSHLVELELQGVDELSSVAREMVRLIETATAPIFAVDFDGNINGWNAKVSELTGLPVEDAMGKSLVHDLVFKESEETVGKLLSRALKGEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIIHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRVDVIGKMLVGEVFGSCCQLKGSDAITKFMIVLHNAHGGQDTDKFPFSFLDRHGKYIQTFLTANKRVNMDGQIIGAFCFLQVVTPELQHALKAQRQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEATGLTDEQKQFLETSAACEKQMLKIIRDVDLERIEDGSLELEKGEFMLGNVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQILADFLLNMVRYAPSPDGWVEIHVRPRIKQISDGLTLLHAEFRMVCPGEGLPPELVQDMFHNSRWATQEGLGLSMSRKILKLMNGEVQYIREAERCYFFVLLELPLTRKSSKKC* | 1131 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr1g2060 | 1130 | Gene3D | PAS domain | 620 | 744 | - | - | |
| Apr1g2060 | 1130 | SMART | HKATPase_4 | 1009 | 1124 | IPR003594 | - | |
| Apr1g2060 | 1130 | CDD | HisKA | 897 | 957 | IPR003661 | GO:0000155|GO:0007165 | |
| Apr1g2060 | 1130 | Gene3D | PAS domain | 769 | 878 | - | - | |
| Apr1g2060 | 1130 | Gene3D | PAS domain | 82 | 332 | - | - | |
| Apr1g2060 | 1130 | CDD | PAS | 767 | 877 | IPR000014 | - | |
| Apr1g2060 | 1130 | ProSiteProfiles | PAS repeat profile. | 756 | 808 | IPR000014 | - | |
| Apr1g2060 | 1130 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 17 | 1125 | - | - | |
| Apr1g2060 | 1130 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 972 | 1120 | IPR036890 | - | |
| Apr1g2060 | 1130 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 83 | 197 | IPR035965 | - |
Showing 1 to 10 of 52 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes