Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2050 ATGGCGTCATCTCTCATCTCAAACCCACCGGCTACCACGGATCGGTCTCGTGACTCGCACAGAACAAGGAAGAAGAAGAAATCCCAGCCCAAGCATCCACAGGAGCCGAGCCACGCCAAATGGAGATCGCAGGCGCAGCAACAGCTTTACTCCTCCAAGCTCCACCAAGCCTTAGCCAGAGTCAACATCTCCGGCGACGCACCGCGCCGCGGGAGAGCCGTCCGGGAAGCCGCCGATAGGGTCCTCGCCGTCGCTGCCCGTGGTAAAACCCGGTGGAGCCGAGCCATCCTCACGAACCGGCTCAAGCTCAAGTTCAGAAAACAGCCCCACAAGAGACAGCGGGTTGTTGCGCCGGCCCGGTCCAAAAAAACCCGGTTCAGCGTTCTCCGGCTCAAGGGAAAAACCCTCCCAACGGTTCAGCGAAAGGTTAAGGTCCTGGGCCGGTTGGTTCCCGGTTGCAGAAAAGAACCGCTTCCGGTTATACTCGAAGAAGCCATTGATTACATACCCGCACTTGAGATGCAGGTTCGAGCCATGACGGCTCTCGCTGACTTACTCTTCGGCTCTTCCTCCGCCGCCGCCGCCTCTTCCTCCGCCTATGCGCCGCCGAGTTGA 615 0.5967 MASSLISNPPATTDRSRDSHRTRKKKKSQPKHPQEPSHAKWRSQAQQQLYSSKLHQALARVNISGDAPRRGRAVREAADRVLAVAARGKTRWSRAILTNRLKLKFRKQPHKRQRVVAPARSKKTRFSVLRLKGKTLPTVQRKVKVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMTALADLLFGSSSAAAASSSAYAPPS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2050 204 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 200 IPR044660 GO:0006355
Apr1g2050 204 MobiDBLite consensus disorder prediction 1 49 - -
Apr1g2050 204 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 10 200 - -
Apr1g2050 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 188 IPR036638 GO:0046983
Apr1g2050 204 CDD bHLH_AtIBH1_like 128 183 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2050 Apr-Chr1 30025677 30026988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2050 37 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 60.736 1.26e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2050 - - gmx:100792237 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2050 1 30025677 30026988 Apr1g2050 1 30025677 30026988 ECH
Apr9g2325 9 30873728 30875539 Apr1g2050 1 30025677 30026988 PCT