Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2004 ATGAAGAGGTTCTACAAGCAGAGAAAAAATGGTATTGACAAGCCATCTAAATCAAAGAAAAAATCTCAGGCGGTCACTGAGTATCATGATAATGAGTACACTGAGGAGGAAAAGATTTTGAGGGAATTTGACATGAACGTAGCTTATGGACCTTGTATTGGATTGACAAGACTAGAACGCTGGGAACGTGCCCACAAGTTCGGTTTGAACCCCCCACAGCATATCAAGATCCTTTTGGAAAGTGACAAAGCTCAGTTAGAATGCTTGTGGAATAAGCACAAGTAG 285 0.4105 MKRFYKQRKNGIDKPSKSKKKSQAVTEYHDNEYTEEEKILREFDMNVAYGPCIGLTRLERWERAHKFGLNPPQHIKILLESDKAQLECLWNKHK* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2004 94 Pfam DNA polymerase delta, subunit 4 8 84 IPR007218 GO:0000731|GO:0006260
Apr1g2004 94 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 15 93 IPR007218 GO:0000731|GO:0006260
Apr1g2004 94 MobiDBLite consensus disorder prediction 1 27 - -
Apr1g2004 94 MobiDBLite consensus disorder prediction 8 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2004 Apr-Chr1 29534558 29534975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2004 1 90 Core DNA Replication Machinery Family AT1G09815 42.478 2.40e-27 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2004 K03505 - sspl:121790241 99.3673