Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1991 ATGGTTCTGAAATTCGCATTTCACATAACCATGATGATAACCTTATGGCCCATACATCTACAGGCATCTGCGCAGGATTCAACCATAACAAAAGATGGGTGTGACCCGACATGTGGAGGTGTTGAAATCCCTTACCCGTTTGGAATCAAATACCCCAAATGCTACGTAGACACGTGGTTTGAAATAGAATGCAGAAACACCAGTTCCGGAGATGAGAGACCTTACATCAAGTCTATAGATATGGAGGTGACAGCCATTGATGTCTCTAACAGCAGGGCTGTGATAAAGAATCCAATTTATAGTAAGAATTGCGGAAAAGAAAAAGGTTTGGCAGTCAAAAACCTGGGAGAAGGCGCTTTCGTGTATTCCCAGGATTACAACAAATTTATGGCCGCAGGTTGCAATAACATTGTTGTTTTGCATTCAGAAGGGTCAGAAGTGAGTGGTTGTGCATCCATCTGTGAAGACAACAAAGATGATGTTTTTGACATCTTCCTTGAAAGCGTTGAATGCCACGGCAAATACTGTTGCGAGAGTACCCTGCCTTCTTATCTTTCAGTGTTTAACGCAACAATTGAAGGTTTGGGTAAGAGCAATGAGTGCGGTTACGCATTGATTGTACAAGATTTTCACAAAGGGGATGCGTTTCTTTATAACTACAGTGAGAGTGAACTAAAGCATTTGAATGAAGTTCCTGCGGTTCTTGAGTGGGAGATTCCGTACATTTCCATCTCGGAACTCATTTTAGATACAGATATAAATGCTGATTGTTCGACCACTAATATTACCTCTACGCAGCACACATATTCAGGTATGAGATGTGAGTGCTTTTATGGCTACCATGGCAATCCCTACATTGTTGGAGGCTGTAAAGCTGTGGTTTCGTTCGCCCCTAGCGTAATGAAAGGTCACCCAAATTGGATTATAATAGGGGTTTCTTTAAGCTTCGGATCCATCAGTTTATTCCTTGGTCTATGGAAATTATATAAAGTTGGGAGAAAAAAGATGATAAAGAAACGAAGAGAAAAGTTCTTCAAACAAAATGGAGGATTATTATTAAAACAAAGATTGTCTTCTGATGAAGTTACCGTCGACAAAGTCAAACTTTTCAAGTTAAAGGATATAGAGAAGGCCACTGACCAATTTAATATGAACAGGGTAATTGGCAAAGGAGGCCAAGGTACTGTTTATAAGGGCATGCTAATAGATGGAAAAATTGTTGCAGTGAAAAAGCTTAAAGTCAAAGGAAAAGTTGAAGAATTCATCAACGAATTTTCCATTCTTTCACAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGATGTTGTTTGGAAACTAAAATTCCTTTGCTTGTTTATGAGTTCATTCCAAATGGTAACCTTTTCGAGTATTTACATGATCAACAAAATGAGCCAATGACATGGGATATGCGTTTAAGAATTGCCACTGAAGTTGCTGGAGCTCTATTTTACTTGCACTCAGCTGCTTCTCAACCCATATATCATAGAGACATCAAATCAACAAATATACTGTTGGATGAAAAGTACAGGGCAAAAGTTGCTGACTTTGGTACATCAAGAATGGTTTCTGTTGAAGCTACCCACCTCACTACAGCAGTTCAAGGTACTTTCGGATACTTAGATCCTGAATATTTTCGTACTAGTCAATTTACAGATAAAAGTGATGTTTATAGCTTTGGAGTAGTTCTTGTTGAACTTTTAACAAGGCAAAAGCCAATATCCTACTTGGGACCTGAGGAAGCTAGAGGTTTAGCTTCATATTTCACTCTTTGTATAGAAGAAAATCGTTTGTTTGATATTATTGATGAAAGAGTTAGGAAGGAAGGGAAGAAAGAACATATCCTTACAGTTGTCGCTGTAGCTAGTAGATGTTTAGAGGTTAATGGAAGAAAACGACCAACAATGAAAGAAGTCACATTGGAATTAGAAAGTGTTCGAAAATTAGAAAAGATGTCTAGTGCACAAGAAAATCAGGAAGAATACGAGTTTGGTGAAATTGAATACTCCCAAGCATGGATTGCATCTTCTCCTACCTCCAATACAGGATCAACTCTAGAATGCAAAACATCGACCTCAGAAGTTATGCCTATTTTTATCGAATGA 2124 0.3828 MVLKFAFHITMMITLWPIHLQASAQDSTITKDGCDPTCGGVEIPYPFGIKYPKCYVDTWFEIECRNTSSGDERPYIKSIDMEVTAIDVSNSRAVIKNPIYSKNCGKEKGLAVKNLGEGAFVYSQDYNKFMAAGCNNIVVLHSEGSEVSGCASICEDNKDDVFDIFLESVECHGKYCCESTLPSYLSVFNATIEGLGKSNECGYALIVQDFHKGDAFLYNYSESELKHLNEVPAVLEWEIPYISISELILDTDINADCSTTNITSTQHTYSGMRCECFYGYHGNPYIVGGCKAVVSFAPSVMKGHPNWIIIGVSLSFGSISLFLGLWKLYKVGRKKMIKKRREKFFKQNGGLLLKQRLSSDEVTVDKVKLFKLKDIEKATDQFNMNRVIGKGGQGTVYKGMLIDGKIVAVKKLKVKGKVEEFINEFSILSQINHRNVVKLLGCCLETKIPLLVYEFIPNGNLFEYLHDQQNEPMTWDMRLRIATEVAGALFYLHSAASQPIYHRDIKSTNILLDEKYRAKVADFGTSRMVSVEATHLTTAVQGTFGYLDPEYFRTSQFTDKSDVYSFGVVLVELLTRQKPISYLGPEEARGLASYFTLCIEENRLFDIIDERVRKEGKKEHILTVVAVASRCLEVNGRKRPTMKEVTLELESVRKLEKMSSAQENQEEYEFGEIEYSQAWIASSPTSNTGSTLECKTSTSEVMPIFIE* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1991 707 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 704 IPR045274 GO:0007166
Apr1g1991 707 Pfam Protein tyrosine and serine/threonine kinase 383 648 IPR001245 GO:0004672|GO:0006468
Apr1g1991 707 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 16 704 - -
Apr1g1991 707 SUPERFAMILY Protein kinase-like (PK-like) 360 649 IPR011009 -
Apr1g1991 707 SMART serkin_6 382 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1991 707 ProSiteProfiles Protein kinase domain profile. 382 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1991 707 Gene3D Transferase(Phosphotransferase) domain 1 456 677 - -
Apr1g1991 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Apr1g1991 707 Pfam Wall-associated receptor kinase galacturonan-binding 34 94 IPR025287 GO:0030247
Apr1g1991 707 Gene3D Phosphorylase Kinase; domain 1 353 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1991 Apr-Chr1 29427793 29432218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1991 34 705 Receptor kinase-like Gene Family AT1G79680 42.952 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Apr1g1991 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1991 - - aprc:113852217 1055.43