Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1968 ATGAAGCCCTTAAGCCTCTTAGTGTTATCTTTGTACTTCTATTCCGTTGTGGGGCAGCTTCCTTCGCAGGACATTTTAGCATTGTTGGAGTTTAAGAAATGCATCAAGCATGACCCTACTGGTTATGTCCTCAATTCCTGGAATGAGGAATCCATTGACTTTGATGGATGCCCATCTTCGTGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCTGGGGTTGTCCTTGATAACTTGGGTCTCTCTGCTGACACTGACTTGAGTGTTTTTTCAAATCTCACAAAACTTGTGAAACTCTCAATGTCTAACAATTCCATATCAGGAAAGCTACCTGACAACATTGCTGATTTCAGAAGCCTTGAATTCCTGGATATCTCCAATAACCTCTTTTCGTCATCCTTGCCCTCTGGAATTGGTAAATTAGGTAGCTTACAGAATCTGTCATTGGCTGGAAATAACTTCTCTGGCCCAATTCCTGATTCTATTTCAGAAATGGCTTCCATAAAGTCTCTGGACTTGAGCCTCAACTCTTTTTCTGGAGCATTGGCAGTGTCTTTGACTAAGATGACTAGCCTTGTATCTCTAAACTTGTCTCATAATGGCTTCACTGGAAAAATTCCCAAAGGTTTTGAGCTAAACTCTGCTCTTGAAAAACTTGACTTGCATGGGAATAGGTTTGATGGTCATTTAGATGCTGAGTTTATGCTTTTATCAAGTGTGAGCTATGTTGATTTCAGTGAGAACATGCTATCTAGTTCTGATTCCAAGCAGTTTCTACCGCGGATATCTGAAACTATTAAGCATTTGAACCTAAGCCACAACCAGCTTACTGGATCATTGGCTAGTGGAGCTGTGGAACCAGTTTTTGAAAATTTGAAGGTGTTGGACCTCAGCTACAATCAATTGGATGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTCCAGGTCCTTAAGCTTAGCAACAACAGATTTTCAGGATTTATTCCTAATGGCCTACTAAAAGGAGATTCTCTGGTTTTAACTGAACTGGATTTGAGTGCCAACAATCTCTCAGGGCCAATTAGTATAATTACATCAATGACACTTCATTCTCTTAATCTCTCATCAAATGGGTTCACTGGTGAACTGCCACCTCTCACTGGAAGCTGTGCTGTACTTGATCTTTCAAATAACAAATTTGAAGGAAATTTAACCAGGATGCTGAAATGGGGGAATATAGAATTTCTTGATCTCAGTGGGAATCAGTTGACAGGAGCCATCCCTGAAGTAACTCCTCAGTTTTTGCGATTAAATTATTTGAATCTATCCCGTAATTCTCTTAACAGCTTCCTTCCAAAAGTCTTAACAGAGTATCCAAAGCTTAGGGTACTTGACATTAGTGCCAACCAATTAGATGGTCTACTTCTGGCTAATCTGCTCACAATGCCCACATTGCAAGAGCTTCATCTTGAAAATAATATGCTCTCTGGTGGCATCAATTTATCATCTTCTCTTGGTCAATCTGATCTTCAGATTCTTGATCTTTCTCACAATCAGCTTGATGGCTATTTTCCTGATGAGTTTGGGTCATTAACAGGCCTGAAATTGCTGAATATTGCTGGAAATAACTTCTCTGGTTCTCTTCCAACCACAATTGCTGATATGAGTTCACTAGACTACCTGGATATATCAGAGAATCATTTTACCGGCCCTCTACCAAACAACATGCCAAAGGGGCTCCAAAACTTTAATGCTTCACAAAATGATCTGTCCGGAGTTGTCCCAGAAATTCTTCGGAAGTTCCCTAGTTCTTCTTTCTTTCCGGGGAATACCAAGTTACATTTTCCAAATGGTCCTCCTGGATCAACAACTTCACCTGCTGAAAGTTCCAAGAGGAAGTCTATGAACACTATTGTTAAAGTAATAATTATAGTATCCTGTGTGGTTGCACTCTTCATATTAATCTTGCTGGCTGTCTTCATACACTACATACGCATATCAAGATCTCCGCCAGAATATGATACAAGTAAGGATATTAATAGGCATCCTGAACCAATTATTTCTGGCCCGGTTCGTGCAACAGACCGGGGTAGTGCTTTGGTTGTATCGGCTGAGGATCTTGTGACTGCTCGTAAAGGGTCACCATCAGATGCAATCACCCCTGATGAAAAAATGGCAGCTGTAACTGGGTTCTCTCCATCAAAGCAGAGCCACTTATCATGGTCACCAGAGTCTGGTGATTCATTTAGTGCTGAAAATCTTGCAAGACTTGATACGAGATCACCAGATAGGTTGATTGGAGAGCTGCATTTTCTTGATGATACAATAACATTGACACCTGAGCAACTCTCAAGGGCACCAGCTGAAGTTTTGGGCAGAAGTAGTCATGGCACTTCTTACAAGGCAACTCTGGAGAATGGTTTATTGTTGAGAGTGAAGTGGTTGAGAGAAGGTGTGGCTAAACAGAGAAAAGAATTTGTTAAGGAGACAAAAAAATTTGCAAACATAAGGCATCCAAATGTCGTGGGATTGAGAGGATATTATTGGGGTCCTACGCAGCACGAGAAGCTTATTCTTTCAGATTACATCTCACCAGGGAGCCTTGCAAGTTTTCTTTATGATCGACCAGGAAGAAAAGGTCCACCATTAACATGGGCTCAGAGGCTCAAAATTGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGATCGTGCCGTTCCTCATGGAAACCTCAAAGCTACAAACGTGCTGTTAGATACAGCAGATATGAATGCACGTGTTGCTGATTACTGCCTTCACAGACTTATGACTCAAGCAGGTACCGTTGAACAGATTCTTGATGCTGGAGTCTTGGGTTACCGCGCACCAGAGTTAGCTGCTTCTAAGAAGCCTATGCCATCCTTCAAATCAGATGTTTATGCTTTTGGAGTGATACTTTTGGAACTTCTAACTGGAAGGTGTGCTGGTGATGTGATATCAGGTGAGGAGGGGGGTGTTGATCTGACAGATTGGGTAAGGTTGCGTGTAGCTGAAGGTAGAGGCTCAGAATGTTTTGATGCTATCTTGATGCCAGAAATGGGTAATCCAGTTGTAGAAAAGGGAATGAAGGAGGTTCTTGGTATAGCTGTTCGATGCATTCGATCTGTTTCTGAAAGGCCTGGTATCAAGACTATATATGAAGATCTCTCTTCTATATAG 3186 0.4143 MKPLSLLVLSLYFYSVVGQLPSQDILALLEFKKCIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADTDLSVFSNLTKLVKLSMSNNSISGKLPDNIADFRSLEFLDISNNLFSSSLPSGIGKLGSLQNLSLAGNNFSGPIPDSISEMASIKSLDLSLNSFSGALAVSLTKMTSLVSLNLSHNGFTGKIPKGFELNSALEKLDLHGNRFDGHLDAEFMLLSSVSYVDFSENMLSSSDSKQFLPRISETIKHLNLSHNQLTGSLASGAVEPVFENLKVLDLSYNQLDGELPGFDFVYDLQVLKLSNNRFSGFIPNGLLKGDSLVLTELDLSANNLSGPISIITSMTLHSLNLSSNGFTGELPPLTGSCAVLDLSNNKFEGNLTRMLKWGNIEFLDLSGNQLTGAIPEVTPQFLRLNYLNLSRNSLNSFLPKVLTEYPKLRVLDISANQLDGLLLANLLTMPTLQELHLENNMLSGGINLSSSLGQSDLQILDLSHNQLDGYFPDEFGSLTGLKLLNIAGNNFSGSLPTTIADMSSLDYLDISENHFTGPLPNNMPKGLQNFNASQNDLSGVVPEILRKFPSSSFFPGNTKLHFPNGPPGSTTSPAESSKRKSMNTIVKVIIIVSCVVALFILILLAVFIHYIRISRSPPEYDTSKDINRHPEPIISGPVRATDRGSALVVSAEDLVTARKGSPSDAITPDEKMAAVTGFSPSKQSHLSWSPESGDSFSAENLARLDTRSPDRLIGELHFLDDTITLTPEQLSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFVKETKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVADYCLHRLMTQAGTVEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISGEEGGVDLTDWVRLRVAEGRGSECFDAILMPEMGNPVVEKGMKEVLGIAVRCIRSVSERPGIKTIYEDLSSI* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1968 1061 Pfam Protein tyrosine and serine/threonine kinase 783 981 IPR001245 GO:0004672|GO:0006468
Apr1g1968 1061 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Apr1g1968 1061 ProSiteProfiles Protein kinase domain profile. 779 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1968 1061 PANTHER OS07G0626500 PROTEIN 6 1061 - -
Apr1g1968 1061 MobiDBLite consensus disorder prediction 606 625 - -
Apr1g1968 1061 SUPERFAMILY L domain-like 289 592 - -
Apr1g1968 1061 Gene3D Phosphorylase Kinase; domain 1 776 856 - -
Apr1g1968 1061 Pfam Leucine Rich repeat 360 376 IPR001611 GO:0005515
Apr1g1968 1061 Pfam Leucine Rich repeat 265 278 IPR001611 GO:0005515
Apr1g1968 1061 Pfam Leucine Rich repeat 291 305 IPR001611 GO:0005515
Apr1g1968 1061 SUPERFAMILY L domain-like 43 378 - -
Apr1g1968 1061 Gene3D Ribonuclease Inhibitor 23 185 IPR032675 -
Apr1g1968 1061 Gene3D Ribonuclease Inhibitor 259 620 IPR032675 -
Apr1g1968 1061 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Apr1g1968 1061 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Apr1g1968 1061 Pfam Leucine rich repeat 410 465 IPR001611 GO:0005515
Apr1g1968 1061 SMART LRR_typ_2 117 141 IPR003591 -
Apr1g1968 1061 SMART LRR_typ_2 476 502 IPR003591 -
Apr1g1968 1061 SMART LRR_typ_2 93 116 IPR003591 -
Apr1g1968 1061 SMART LRR_typ_2 549 573 IPR003591 -
Apr1g1968 1061 SMART LRR_typ_2 312 336 IPR003591 -
Apr1g1968 1061 SMART LRR_typ_2 428 451 IPR003591 -
Apr1g1968 1061 SMART LRR_typ_2 525 548 IPR003591 -
Apr1g1968 1061 SMART LRR_typ_2 189 212 IPR003591 -
Apr1g1968 1061 SMART LRR_typ_2 289 311 IPR003591 -
Apr1g1968 1061 PANTHER - 6 1061 - -
Apr1g1968 1061 ProSiteProfiles Leucine-rich repeat profile. 291 313 IPR001611 GO:0005515
Apr1g1968 1061 SUPERFAMILY Protein kinase-like (PK-like) 782 1058 IPR011009 -
Apr1g1968 1061 Gene3D Transferase(Phosphotransferase) domain 1 858 1061 - -
Apr1g1968 1061 Gene3D Ribonuclease Inhibitor 187 258 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1968 Apr-Chr1 29225347 29229794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1968 1 1049 Receptor kinase-like Gene Family AT1G55610 27.409 2.19e-78 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr1g1968 PK_Tyr_Ser-Thr 1.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1968 - - gmx:100793639 1848.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1968 1 29225347 29229794 Apr1g1968 1 29225347 29229794 ECH