Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1966 ATGGGGAAGGTCCTTGGGAATGGACTCTTTATTGTGCTGTTTCTGGTGATTGTGTCGGTGACGTTTAGCATTATAGAGGCTCAACCAAAGTCATTTCACTTGAATTGTGGTTCAAATTCTTCTGTGAATGTGGAGGGCAGGATATGGGTTGGGGACATGGCTACTGATACCAATGTCACTCTCAGCTCCTCTGGTGTTGCTGCTTCCACTTCTACATTAAGTGGCAGTTCAGCCTATGATCCACTCTACAAGACAGCTAGAATTTTCACGGTTCCTTTAAATTACACAATCAAAGATGTTCAAGGAAACTATTTTGTTAGGTTCCATTTCTGCCCCTTTGTTACTGAGAACTACAATATGAATGAGTCCTCATTTGGTGTTGTGGTCAATGGTCTGAAACTATTGTCTGAGTTTGAAGTTCCAGGTAAGATATCCCACAAGAATATGAATTTGCAGAGTTCTGGAAGGAATTCTAGTTCATTCTTCTTGATCAAAGAATATATTCTGGCTGTCAATGATATGCTTGTGATTGAGTTTGTTCCCACCAGAAGCTCCTTTGGCTTCATCAATGCCATTGAGATTGTACAAGTTGTAGGTGAGCTTTTTTCTGGCTCCGTTAGTAGAGTTGGTGGAAGTGGTGGAAGCTTAAATTTGATGGGGCGTGGGATGGAGACTATGTATAGGTTAAACGTTGGCGGCCCTGAGATTCAATCTGATGAGGATCGTGATCTTTGGAGAACTTGGGAAGTAGACTCAAGCTATATGATCACCGAAAATGCAGGGTCTAGAATTAAGAGTAGTTCTAATATCACATATGCTTCCATGAATGATACTTCAGTGGCTCCCCTCCTTGTGTATGAAACTGCAAGGGCAATGTCTAACACTGAAGTCTTGGATAAAAGATTCAACATGTCATGGAAATTTGAAGTAGATCCCGATTTTGATTATTTGATCCGGTTACATTTCTGTGAGCTGGTTTATGAAAAGGCTAATGAGAGAATATTCAGGATCTACATTAACAACAGAACCGCTGCAGATAATGTTGATATTTTTGTACGAGCAGGAGGGATGAACAAAGCTTATCACCAAGATTATTTTGATCCTGTGTCGTCAAGGATTGACACGGTTTGGGTTCAGCTAGGACCTGACACAGCTGCTGGTGCTGCAGGAACTGATGCTCTCTTGAATGGTTTGGAGATTTTCAAGCTTAGTCGAAATGGTAATCTTGCCTATGTGGAGAGATATGATTTTGGTGGCAATGCAACAAGCAAATCAAAAGCAAGAGTAGTTTTGGTGGGAGTTGGAGCAGGACTAGCTTCTATAGCTATAATTGCATTTATAGTTGTTCTTGTTTTCTGTTTTTGCAAAAGCAGGAGGGAAGAATCAAGTGACACCAAAAACAACCCTCAGGGATGGCGACCGTTGTTCCTGTATGGAGGAGCTGCTGTAAACAGCACTGTTGGTGCCAAGGGATCAGCAGGAACTCAAAAGCCATATGGATCTGTGGTCTCAACCCGACCTGGCAAGCGGTTCACATTGGCAGAAATCACTGCTGCAACAAATAATTTTGACGAAAGTTTGGTAATTGGAGTTGGAGGATTTGGTAAGGTGTATAAGGGGGAGATTGAAGATGGTGTACTTGTTGCAATCAAGCGTGCCAACCCGCAGTCTGAGCAAGGTCTAGCTGAATTTGAGACAGAAATTGAGATACTCTCTAAACTCAGACACAGGCATCTAGTGTCCTTGATTGGTTTCTGTGAAGAGCAAAATGAAATGATTTTGGTTTATGAATATATGGCAAATGGAACTCTAAGAAGCCATCTATTTGGGAGTGATCTTCCTCCATTAACTTGGAAGCAGCGTCTAGAAGTATGCATTGGAGCTGCAAGGGGACTTCACTACCTTCATACAGGGGCTGATCGCGGAATCATTCACAGGGATGTCAAGACAACTAATATACTCTTAGATGAGAACTTTGTAGCCAAAATGTCTGATTTTGGTTTGTCAAAAGATGGTCCAGCTTTTGAACATACTCATGTTAGCACAGCTGTGAAAGGAAGTTTTGGCTATCTAGACCCAGAGTACTTTAGAAGACAACAATTGACTGAGAAATCAGATGTTTACTCCTTTGGAGTTGTGTTGTTTGAGGTTGTTTGTGCTAGAGCTGTAATAAACCCAACCTTGCCTAAGGATCAAATCAACCTTGCAGAATGGGCAATGAGATGGCAAAGACAAAGATCACTTGACACGATCATTGATCCTCAGCTTAGAGGAAATCTTTGTCCAGAATCATTGTCTAAGTTTGGTGAGATAGCTGAAAAGTGTCTTGCTGATGATGGCAAGAGCCGCCCCACCATGGGAGAGGTGTTATGGCACTTGGAATATGTGTTGCAACTACATGAAGCTTGGCTTAACATGAACACCAAAGAAACTTCCTTCTCAAGTAATCAAGCTTTGAGAGGTCTAAAAGATGAAGGACTAGAAGTGGTTCAAGAGCCTTCCAAGTCAACATGA 2514 0.4181 MGKVLGNGLFIVLFLVIVSVTFSIIEAQPKSFHLNCGSNSSVNVEGRIWVGDMATDTNVTLSSSGVAASTSTLSGSSAYDPLYKTARIFTVPLNYTIKDVQGNYFVRFHFCPFVTENYNMNESSFGVVVNGLKLLSEFEVPGKISHKNMNLQSSGRNSSSFFLIKEYILAVNDMLVIEFVPTRSSFGFINAIEIVQVVGELFSGSVSRVGGSGGSLNLMGRGMETMYRLNVGGPEIQSDEDRDLWRTWEVDSSYMITENAGSRIKSSSNITYASMNDTSVAPLLVYETARAMSNTEVLDKRFNMSWKFEVDPDFDYLIRLHFCELVYEKANERIFRIYINNRTAADNVDIFVRAGGMNKAYHQDYFDPVSSRIDTVWVQLGPDTAAGAAGTDALLNGLEIFKLSRNGNLAYVERYDFGGNATSKSKARVVLVGVGAGLASIAIIAFIVVLVFCFCKSRREESSDTKNNPQGWRPLFLYGGAAVNSTVGAKGSAGTQKPYGSVVSTRPGKRFTLAEITAATNNFDESLVIGVGGFGKVYKGEIEDGVLVAIKRANPQSEQGLAEFETEIEILSKLRHRHLVSLIGFCEEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMSDFGLSKDGPAFEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSLDTIIDPQLRGNLCPESLSKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNMNTKETSFSSNQALRGLKDEGLEVVQEPSKST* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1966 837 PANTHER OS07G0166700 PROTEIN 21 833 IPR045272 GO:0004714|GO:0006468
Apr1g1966 837 Pfam Protein tyrosine and serine/threonine kinase 528 790 IPR001245 GO:0004672|GO:0006468
Apr1g1966 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Apr1g1966 837 CDD STKc_IRAK 529 794 - -
Apr1g1966 837 Gene3D - 30 198 - -
Apr1g1966 837 Gene3D - 222 405 - -
Apr1g1966 837 PANTHER OSJNBA0058K23.13 PROTEIN 21 833 - -
Apr1g1966 837 SUPERFAMILY Protein kinase-like (PK-like) 499 795 IPR011009 -
Apr1g1966 837 Gene3D Phosphorylase Kinase; domain 1 486 598 - -
Apr1g1966 837 SMART serkin_6 523 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1966 837 ProSiteProfiles Protein kinase domain profile. 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1966 837 Gene3D Transferase(Phosphotransferase) domain 1 599 819 - -
Apr1g1966 837 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Apr1g1966 837 Pfam Malectin-like domain 34 402 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1966 Apr-Chr1 29204999 29207808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1966 13 819 Receptor kinase-like Gene Family AT1G30570 65.887 0.0 1119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr1g1966 Malectin_like 2.9e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1966 - - gmx:100791403 1431.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1966 1 29204999 29207808 Apr1g1966 1 29204999 29207808 ECH