Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1952 ATGAATTTCCTTCGTATCACTGCAACAGTTTTGTGCTGTGTTGTGGTTGTGCTTGGAGCACTACCCTCCTCAAATTCACAGCTAGATCCTTCATTTTACAATGATACATGTTCAGATGTTCATTCAATCATAAGTGGCGTCCTCGCAAACGTTTCACAATCTGATCCTCGTATTCTTGCCAGTCTCATCAGACTTCACTTTCATGACTGTTTTGTTCAAGGGTGTGACGCATCAGTTTTGTTGAATGACACCGATACGATCGTGAGCGAGCAAGGGGCATTGCCAAACAACAACTCCATACGAGGTTTGGATGTTGTGAATCAGATAAAGACTGCTGTGGAAAATGCTTGTCCCGGCATAGTTTCTTGTGCTGATATTCTTGCTCTAGCAGCTGAAATATCTTCTGAACTGGCTAGTGGTCCTTCTTGGGAAGTTCCATTGGGAAGAAGGGATAGTTTAAATGCAAGCATAACCCTTGCTAATACAAGTCTTCCACCTCCCATCTTCACTCTAGATCAACTTAAAGCTTCATTTGCTAATCAAAGTCTTAACACTACTGATTTAGTTGCACTCTCAGGTGCTCATACCATTGGCAGAGCCAAGTGCGGTTTATTTATTGGGCGATTATACAATTTCAACAACACTGGCAATCCTGATCCTACTCTCAACACAACCCTTTTGCAATCATTACAAGCAATATGCCCCAATGGGGGACCAGGGACTAATCTCACCAATTTGGACCTAACAACTCCTGATACATTTGACTCTAACTACTACTCCAATCTTTTGCTTCAAAACGGCTTGCTCCAAAGCGATCAAGAGCTATTTAGCACGACTGATGCAGATACTATTGCCATTGTCAATAGTTTCAGCAGTAACCAAACTCTTTTCTTTGAAAACTTTAAGGCATCAATGATAAAAATGGGCAACATTGGAGTTCTGACAGGATCTCAAGGAGAAATTCGAACACAGTGTAATTTTGTGAATGGAAATTCTTCTAATCTGACTACCCCAATCACCAATATTAAATCACCAGAAGATGGCATGGTCAGCTCAATCTAA 1062 0.4115 MNFLRITATVLCCVVVVLGALPSSNSQLDPSFYNDTCSDVHSIISGVLANVSQSDPRILASLIRLHFHDCFVQGCDASVLLNDTDTIVSEQGALPNNNSIRGLDVVNQIKTAVENACPGIVSCADILALAAEISSELASGPSWEVPLGRRDSLNASITLANTSLPPPIFTLDQLKASFANQSLNTTDLVALSGAHTIGRAKCGLFIGRLYNFNNTGNPDPTLNTTLLQSLQAICPNGGPGTNLTNLDLTTPDTFDSNYYSNLLLQNGLLQSDQELFSTTDADTIAIVNSFSSNQTLFFENFKASMIKMGNIGVLTGSQGEIRTQCNFVNGNSSNLTTPITNIKSPEDGMVSSI* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1952 353 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PANTHER PEROXIDASE 72-RELATED 8 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Apr1g1952 353 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 Gene3D Peroxidase, domain 2 165 308 - -
Apr1g1952 353 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 Pfam Peroxidase 49 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1952 353 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Apr1g1952 353 PANTHER PEROXIDASE 8 337 - -
Apr1g1952 353 Gene3D - 32 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1952 Apr-Chr1 29053026 29056288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1952 10 330 Peroxidase AT5G06720 60.125 1.33e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1952 K00430 - gmx:100814455 511.916