Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1951 ATGCAGGTTCTCGCAAGCCCCAACAGGTTCACAAACTCAAATATCAGTATGAGTCCCATTCGTGTGGAAGTAGCAATTCTGTGTTGTGCATTGGTTGTGCTTGGAGCACTACCCTTTTCCTCAGATGCACAGCTAGACCCTTCCTTTTACAATAAATCATGTCCCAATGTGCATTCCATTGTACGTGAAGTCATCAGAAACGTTTCTAAATCCGATCCTCGAATGCTTGCTAGTCTCATCAGACTCCACTTTCATGATTGTTTCGTTCAAGGGTGTGATGGATCAATTTTGTTGAATGATACCGCTACGATTGTGAGTGAACAAAGTGCAGCGCCGAATAACAACTCTATAAGAGGTTTGGATGTTGTGAATCAGATCAAAACTGCAGTGGAAAATGCTTGTCCTGGTGTTGTTTCTTGCGCTGATATTCTTGCCCTTGCTGCTGAAATATCCGTTGTTCTGGCCAATGGTCCTGATTGGAAAGTTCCCTTGGGAAGAAGGGATAGTTTAACAGCAAACAAAACCCTTGCTAATCAAAATCTTCCAGCTCCATTCTTCAACTTTACTCAGCTCAAGTCCGCCTTTGCTGCTCAAGGTCTCAACACTACTGATCTAGTAACACTCTCAGGTGCTCATACATTTGGAAGAGCTCACTGCTCTTTATTCGTCAGCCGATTATACAATTTCAGCAACACAGGCAATCCTGATCCAACTCTTAACACAACTTACTTACAAACACTGCGTGCAATATGCCCCAATAGTGGACCTGGCACCAACCTTACCAATTTTGACCCAACCACTCCTGATACCTTTGACAAGAATTACTACTCCAATCTTCAGGTTCACAAGGGCTTGCTTCAGAGTGATCAAGAGTTGTTTTCCACACCTGGTGCTGATACCATTGACCTAGTCAATAGGTTTAGCAGTAACCAAACTCTTTTCTTTGAGAACTTTAAGGCTTCCATGATCAAAATGGGGAACATTAGAGTGTTAACTGGATCTCAAGGACAAATTAGAAACAAATGTAACTTTGTTAATGGGAACTCTGTTGGACTGGCCACCAAAGAATCATCAGAAGATGGCATGGTTAGCTCAATCTAA 1101 0.4242 MQVLASPNRFTNSNISMSPIRVEVAILCCALVVLGALPFSSDAQLDPSFYNKSCPNVHSIVREVIRNVSKSDPRMLASLIRLHFHDCFVQGCDGSILLNDTATIVSEQSAAPNNNSIRGLDVVNQIKTAVENACPGVVSCADILALAAEISVVLANGPDWKVPLGRRDSLTANKTLANQNLPAPFFNFTQLKSAFAAQGLNTTDLVTLSGAHTFGRAHCSLFVSRLYNFSNTGNPDPTLNTTYLQTLRAICPNSGPGTNLTNFDPTTPDTFDKNYYSNLQVHKGLLQSDQELFSTPGADTIDLVNRFSSNQTLFFENFKASMIKMGNIRVLTGSQGQIRNKCNFVNGNSVGLATKESSEDGMVSSI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1951 366 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 ProSiteProfiles Plant heme peroxidase family profile. 44 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PANTHER PEROXIDASE 24 353 - -
Apr1g1951 366 Pfam Peroxidase 61 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Apr1g1951 366 PANTHER PEROXIDASE 72-RELATED 24 353 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 Gene3D - 49 346 - -
Apr1g1951 366 SUPERFAMILY Heme-dependent peroxidases 44 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1951 366 CDD secretory_peroxidase 44 345 IPR033905 GO:0004601|GO:0042744
Apr1g1951 366 Gene3D Peroxidase, domain 2 182 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1951 Apr-Chr1 29042170 29044334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1951 31 349 Peroxidase AT5G06730 59.875 2.75e-139 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1951 K00430 - gmx:112997600 593.578