Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1941 ATGAAGGAAGGGGGTGGTAGGAAGCAAGGTACAGCATCACCTTGTGCTGCATGCAAGCTTCTTAGAAGAAGGTGTGCACAAGATTGTGTTTTTGCTCCATATTTCCCAGCCGATGAACCCCAGAAGTTTGCAAACGTTCACAAGGTGTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGACCTACCAATGCATCAGAGAGGGGATGCAGTGAGTAGCATGGTGTATGAAGCCAACGCCAGAGTCCGAGATCCTGTTTATGGGTGCGTTGGAGCCATCTCTTCGCTTCAACAACAGATTGATGTGTTACAGACCCAATTGGCCCTGGCCCAAGCTGAAGTGGTACACCTTCGGGTCAGACAAAATAGGTGCTTTTCCAATCCTGGGCCCGGGCCCACTAGCCCAACCAATAGTGGGTCCCCTTCATCCAAGATCATGGACTCACATGCTAAGCCTATTTTTGACATGGACATGGTGGTGGATCAAGCCGAATATGGTGGTTCAATGTGGTCATAA 516 0.4942 MKEGGGRKQGTASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVVHLRVRQNRCFSNPGPGPTSPTNSGSPSSKIMDSHAKPIFDMDMVVDQAEYGGSMWS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1941 171 Coils Coil 93 113 - -
Apr1g1941 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 159 - -
Apr1g1941 171 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Apr1g1941 171 MobiDBLite consensus disorder prediction 125 147 - -
Apr1g1941 171 MobiDBLite consensus disorder prediction 126 145 - -
Apr1g1941 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 159 - -
Apr1g1941 171 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1941 Apr-Chr1 28955013 28958482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1941 1 171 AS2 family AT1G31320 72.989 6.73e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr1g1941 LOB 1.8e-43 No_clan