Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1937 ATGCTATCTTTGAATGTTGTTCCATCATCATCCTCTGTCACTTTCAGCAAACCAAGTCACCAATGTTTCATAAATGCACCTCCCATTCTCAAACCAAATCTTCTCAGCAGGCCACATGAATCAGGTCTCAAAAGTTCCAATCTTTCTCTCATGCACACATCTCGGATCCAACATTCTATAACAAATTTAAGCTGTTCTAACAGATTCCTTTCACACCCTTTTGAGTTCTTAGCAAAACCCAGAAATCAAATTGTTAAGGCAGCATCTAATGTTAATCCTGAGGGAGAAGGTGCTGTCCCCAGTAATCCCAAATCTAAGAATCTCAAACTTGCTCTAGTATTTGGGCTATGGTACTTCCAAAACATTGTCTTCAATATTTACAACAAGAAAGTGTTGAACATATTCCCATTCCCATGGCTTCTTGCTTCTTTCCAACTCTTTGTTGGGTCCATTTGGATGTTGGCCCTCTGGACCTTAAAGCTTCAACCTTGTCCAAAAATCACAAAACCTTTCATCATTGCTCTCCTTGGACCTGCTTTGTTCCACACAATAGGACACATATCAGCTTGTGTTTCATTCTCTAAGGTTGCTGTGTCCTTCACCCATGTCATCAAATCAGCAGAACCTGTTTTCTCTGTCATGTTTTCTTCTGTCCTTGGTGATAGATACCCCATTCAGGTTTGGCTCTCAATTTTACCTATTGTGCTTGGTTGTTCCTTAGCAGCTGTCACTGAGGTGTCTTTCAATGTACAAGGATTGTGGGGTGCACTCATTAGTAATGTTGGTTTTGTATTGAGGAACATCTATTCTAAAAGGAGTTTACAGAATTTCAAGGAAGTTGATGGTTTGAACTTGTATGGTTGGATTACCATAGTTTCATTGCTCTACCTGTTTCCAGTGGCTATTTTTGTAGAAGGATCACAGTGGATTCCTGGGTATTACAAGGCAATAGAAGCTATAAGCAAACCATCCACATTTTATATATGGGTTTTGGTGTCTGGTGTGTTCTACCATCTATATAATCAATCATCTTACCAAGCCTTGGATGAAATTAGCCCACTAACTTTTTCAGTGGGAAACACAATGAAGAGAGTGGTGGTGATTGTTTCTTCAGTTTTGGTGTTCAGGAATCCTGTTAGACCACTTAATGCCCTTGGATCTGCCATTGCTATTCTTGGAACATTCCTGTATTCACAGGCGAATTCCGCAAAGAAAGCAAAGAAAATTGAAGGTGAAAAGAATAGTTAG 1248 0.3966 MLSLNVVPSSSSVTFSKPSHQCFINAPPILKPNLLSRPHESGLKSSNLSLMHTSRIQHSITNLSCSNRFLSHPFEFLAKPRNQIVKAASNVNPEGEGAVPSNPKSKNLKLALVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFVGSIWMLALWTLKLQPCPKITKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVMFSSVLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKRSLQNFKEVDGLNLYGWITIVSLLYLFPVAIFVEGSQWIPGYYKAIEAISKPSTFYIWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNALGSAIAILGTFLYSQANSAKKAKKIEGEKNS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1937 415 Coils Coil 414 415 - -
Apr1g1937 415 PANTHER SOLUTE CARRIER FAMILY 35 52 410 - -
Apr1g1937 415 Pfam Triose-phosphate Transporter family 108 398 IPR004853 -
Apr1g1937 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 289 400 - -
Apr1g1937 415 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 108 408 IPR004696 GO:0016021|GO:0022857|GO:0055085
Apr1g1937 415 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 52 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1937 Apr-Chr1 28901837 28903550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1937 1 415 Antiporters AT5G17630 66.745 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1937 K15283 - gmx:100101869 691.034