Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1918 ATGGCTAACCAAAACAACATCGAGGTTGTGTGCGTGACCGGAGCCAACGGTTTCATCGGGTCATGGCTGGTTCGAACGCTATTGGAGAAGGAGAATCCACACTACACCATCCACGCCACCATCTTCCCCGGTTCTGACGCTTCCCACCTCTTCACCCTCCACCCCGACGCAACCAACCGCATCACCCTCTTCCCCGCCGACATCCTCGACCCCGCCGCCGTTTCCCGCGCCGTCGCCGGCAGCTCCGGTGTCTTTCACGTGGCATCCCCCTGCACTCTCGAGGACCCCGCCGACCCACACAAGGAGCTTGTGGAGCCCGCGGTGGAGGGCACTCGGAACGTTCTAGAAGCCGCGAAGCGCGTGGTGCTCACCTCTTCCATCTCCGCCATGGTGCCCAACCCTAATTGGCCGGCGAATAGGGTGGTGGACGAGTCGTCGTGGACGGACGTGGAGTTCTGCAAGGAGATGGGGAAGTGGTACCCGGTGGCGAAGACGGAGGCGGAGAGGGCGGCTTGGGGGTTTGACGGCGTGGACGTGGTGGCAATTCAGCCGGCGACGTGTTTGGGGGCGCTGCTGCAGGCGTCGCTGAATGCTAGTTCGGCGGTGTTGCAGAGGTTGATGATGGGGTCGAGAGAGACGCAGGAGTATCATTGGTTGGGTGCGGCGCATGTTAAGGACGTTGCAAAAGCTCATGTTTTGCTCTATGAGACACCCACTGCTTCTGGTAGATATCTTTGTACCAATGGTATCTACCAGTTTTCTACTTTTGCTACTATTGTCTCTCAATTGTACCCTCACTTCCCCATTCACAGGTTCCCAGCGGAAACACAACCTGGTCTGACACCGTGTAAAGATGCAGCAAAGAGATTAATAGACTTAGGCTTTGTCTTCACACCAATTGAAGATGCTGTGAGAGAAGCAGCAGAGAGCCTTATGGCTAAAGGCTTTCTGCAGCAAACACCCTTACAGTCACGAGATTAG 981 0.5668 MANQNNIEVVCVTGANGFIGSWLVRTLLEKENPHYTIHATIFPGSDASHLFTLHPDATNRITLFPADILDPAAVSRAVAGSSGVFHVASPCTLEDPADPHKELVEPAVEGTRNVLEAAKRVVLTSSISAMVPNPNWPANRVVDESSWTDVEFCKEMGKWYPVAKTEAERAAWGFDGVDVVAIQPATCLGALLQASLNASSAVLQRLMMGSRETQEYHWLGAAHVKDVAKAHVLLYETPTASGRYLCTNGIYQFSTFATIVSQLYPHFPIHRFPAETQPGLTPCKDAAKRLIDLGFVFTPIEDAVREAAESLMAKGFLQQTPLQSRD* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1918 326 CDD FR_SDR_e 10 295 - -
Apr1g1918 326 Pfam NAD dependent epimerase/dehydratase family 10 240 IPR001509 -
Apr1g1918 326 PANTHER - 8 306 - -
Apr1g1918 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 310 IPR036291 -
Apr1g1918 326 Gene3D - 2 325 - -
Apr1g1918 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1918 Apr-Chr1 28731441 28733311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1918 8 317 Monolignol Biosynthesis Gene Families AT2G02400 65.094 7.32e-153 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1918 - - gmx:100795399 521.546