Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1907 ATGGCGTCGGAGACTGATATTTCTCCGGCTGATACTCGCCGGGCTCCCGGCAAGGAGCAACAAGCCGCCGGCGTCGGAATCCTTCTTCAGATCATGATGTTGGTCTTGTCTTTCGTTCTCGGCCACGTTCTCCGTCGCAAGAAGATTTACATCATCCCCGAAGCCAGTGCTTCCCTTCTCATAGGTCTAATTGTTGGCATATTAGCTAACATTTCAGACACGGAAACTAGTATCAGGGCGTGGTTCAATTTTCACGAGGAATTTTTCTTTCTGTTCCTGTTACCTCCCATCATATTTCAGTCTGGGTTCAGTCTTGCACCTAAACCCTTTTTCTCAAATTTTGGAGCGATTGTGACATTTGCTATTTTTGGTACCTTTCTAGCTTCAGTTGTAACGGGTGTCTTGGTCTATCTTGGTGGGTTGCTCTTCCTCATGTATAGGCTCCCATTCGTTGAGTGCCTGATGTTTGGTGCTCTCATATCAGCAACTGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTGGGCACAGATGTCAATCTATATGCATTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATCAGTTAGAGCTCATCCATCTGGACAAAATTTATTCATGGTTATTGTTCGATTTTTGGAGACTTTTTTTGGGTCAATGTCTGCAGGTGTTGGAGTTGGATTTATTTCTGCTTTACTATTTAAGTATGCAGGATTGGATATTGACAACCTTCAGAACTTGGAGAGTTGTCTTTTTGTTCTTTTCCCATATTTCTCGTACATGCTTGCTGAGGGCCTTGGCCTGTCTGGTATTGTATCAATACTGTTCACAGGAATAGTTATGAAGCATTATACATTTTCAAATTTGTCACAAAGTTCGCAAAGATTTGTCTCTGCTTTTTTCGAGTTGATATCTTCTTTAGCTGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAACAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCGGCAAATGTCTTCTCTTGTGCTTATTTGGTCAATCTGGTCAGACCGTCTCATCGAAACATACCTGCAAAACATCAGAAGGCACTTTGGTATAGTGGGCTTCGAGGTGCAATGGCTTTTGCGCTTGCTTTGCAATCAATTCATGATCTTCCAGAAGGACATGGACAGACCATCTTCACCGCCACTACAGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTTGTTGGTGGGGACAGTCATAATGATAGTCCTTTGGCTTCAAATTTCGATGGAAACCATGGATATATTGCTCCTTCTTACGATGAAGAATCATCATCAGGCAACAAAATCAAGATGAAGCTAAAAGAATTTCACAAGAGTGCTGCATCTTTTACAGCATTGGATAAAAACTACCTCACCCCATTCTTTACAAGTCAAAATGGAGATGAAGATGATGAAGCCGAGCCTTTTACTTCTACAAGATCGGGTTTTCACGGCCAGAACCATTATTCATCATGA 1596 0.4142 MASETDISPADTRRAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIIPEASASLLIGLIVGILANISDTETSIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFLASVVTGVLVYLGGLLFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSSVRAHPSGQNLFMVIVRFLETFFGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYTFSNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPSHRNIPAKHQKALWYSGLRGAMAFALALQSIHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDSHNDSPLASNFDGNHGYIAPSYDEESSSGNKIKMKLKEFHKSAASFTALDKNYLTPFFTSQNGDEDDEAEPFTSTRSGFHGQNHYSS* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1907 531 MobiDBLite consensus disorder prediction 501 531 - -
Apr1g1907 531 Pfam Sodium/hydrogen exchanger family 33 436 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr1g1907 531 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 31 448 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr1g1907 531 PANTHER SODIUM/HYDROGEN EXCHANGER 14 514 IPR018422 GO:0006812|GO:0015299|GO:0016021
Apr1g1907 531 Gene3D - 150 202 - -
Apr1g1907 531 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr1g1907 531 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr1g1907 531 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr1g1907 531 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr1g1907 531 PANTHER SODIUM/HYDROGEN EXCHANGER 6 14 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1907 Apr-Chr1 28652691 28660343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1907 20 438 Antiporters AT3G05030 34.467 7.23e-54 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1907 K14724 - gmx:100790830 929.087