Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1881 ATGGACTCAAAAACTAGTGCTAGAGCTCTCCCAAAGCAGCATCAGAAGACGGCTGGGATTCAAACCCTTGAAGCAAAAGACTTTGGATCTTCTTCACTGCCAGTTCCAAAGACGGGAAAACCTGAGCTGGCTGCTCCTGAGGATTTATCAAAGTCTGTGGAAAAGACGTCCACCAAGCAGAATACTGGAGAAATTGCTGAAAGCAAGAAGTTTGGAGTTTCAATCCACAAAGGGTCTGCTGATTCCTTGAATAATAAGAGTGGTTCTCGTGCTTCCTCATCTGTTCTGGACAAAGCATCTGGAGGAGTGAATCATGCTGTTAACGAGAACATAGGCTCGCAGGAAAGCTCTATTGATCAAGATAAAAAGACATCGGAATATGGTAGTATGAAGAACAGTTCTGTTTCTGCCAAAGTTAGTGATGGGGCCAGCAGTCTTGCAAAGACAAGTGGAAGTGCCAAGATCAGCGATCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGTGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCATAAACAAGCCTCACAAGGCAAATGACTTGAGATGGGAAGCTATCCAAGCGGTTCGAAGTAGAGATGGGGTATTGGGTTTAGGTCACTTTAGACTGTTGAAGAGGCTGGGATGTGGGGATATTGGTAGTGTGTACCTCTCTGAGTTGAGTGGAACTAAATGTTACTTTGCAATGAAGGTAATGGACAAAGGGTCCCTAGCAAGTCGTAAAAAGCTACTTCGTGCTCAGACCGAACGAGAAATTCTGCAGTCGCTTGACCACCCATTTCTCCCAACTTTGTACACCCATTTTGAGACAGAGAAATTCTCATGCTTGGTAATGGAATTCTGCCCAGGTGGAGACCTCCATACACTTAGGCAGAAGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTAAAATTTTATGTGGCAGAGGTCCTACTGGCTTTGGAGTACCTACACATGCTTGGGATTGTCTACCGTGACCTTAAGCCAGAAAATGTCCTTGTTAGGGATGACGGACATATTATGCTCTCTGACTTTGATCTTTCCCTCCGCTGTGCTGTTAGTCCAACCCTTGTTAAAACCTCATCCACGGATTCTGAACCTTTAAGAAAGAATCCTGTTTACTGTGTCCAACCTGCATGTATTGAGCCACCTTCCTGCATCCAACCATCATGTGTTGCTCCTACTACATGCTTTTCACCCCGCCTCTTTTCGAGCAAATCGAAGAAAGACCGGAAGCCCAAAACCGAAATTGGCAACCAAGTGAGTCCGTTACCTGAGCTTATTGCCGAGCCTACTGATGCTCGGTCTATGTCATTTGTTGGAACCCATGAATACTTGGCACCTGAGATCATTAAGGGTGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTCGGGATCTTTCTATACGAGCTGTTGTTCGGTAAAACTCCTTTCAAGGGATCTGGAAACCGAGCTACGTTGTTTAACGTCGTGGGTCAGCCCCTGCGATTTCCAGAAGCACCTGTTGTCAGTTTTGCAGCAAGGGATCTTATAAGGGGGTTGCTTGTAAAGGAACCTCAGCACAGATTGGCGTATAAACGAGGCGCCACCGAGATTAAGCAACATCCCTTCTTTGAAGGTGTGAATTGGGCACTGATCAGATGTGCTACCCCCCCTGAGATCCCAAAGCCTGTAGAGTTTGAGAAGATACCTTCCCCAGCTTCATCAGCTGGTGGTGAAAAGGCTGTTAACCACATGTCAATACCTAATCAGAAAGGTTCTGATAATTATCTGGAGTTTGATTTCTTCTAG 1851 0.4571 MDSKTSARALPKQHQKTAGIQTLEAKDFGSSSLPVPKTGKPELAAPEDLSKSVEKTSTKQNTGEIAESKKFGVSIHKGSADSLNNKSGSRASSSVLDKASGGVNHAVNENIGSQESSIDQDKKTSEYGSMKNSSVSAKVSDGASSLAKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSFSSSINKPHKANDLRWEAIQAVRSRDGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSSTDSEPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEFEKIPSPASSAGGEKAVNHMSIPNQKGSDNYLEFDFF* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1881 616 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 616 - -
Apr1g1881 616 MobiDBLite consensus disorder prediction 78 99 - -
Apr1g1881 616 SMART serkin_6 220 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1881 616 ProSiteProfiles Protein kinase domain profile. 220 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1881 616 Pfam Protein kinase domain 221 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1881 616 Pfam Protein kinase domain 455 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1881 616 Gene3D Phosphorylase Kinase; domain 1 218 303 - -
Apr1g1881 616 PANTHER FLIPPASE KINASE 1-RELATED 3 616 - -
Apr1g1881 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 341 353 IPR008271 GO:0004672|GO:0006468
Apr1g1881 616 CDD STKc_phototropin_like 219 582 - -
Apr1g1881 616 SUPERFAMILY Protein kinase-like (PK-like) 195 583 IPR011009 -
Apr1g1881 616 Gene3D Transferase(Phosphotransferase) domain 1 304 379 - -
Apr1g1881 616 Gene3D Transferase(Phosphotransferase) domain 1 452 576 - -
Apr1g1881 616 MobiDBLite consensus disorder prediction 10 28 - -
Apr1g1881 616 MobiDBLite consensus disorder prediction 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1881 Apr-Chr1 28404834 28409477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1881 39 616 AGC Kinase Gene Family AT5G47750 77.720 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr1g1881 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1881 K08286 - gmx:100781600 1095.49