Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1821 ATGCTTCAAAACCAACGTTCAGGGGGGAAACTTCTTTTAACTGTCTCTTTTGACAGCAAAGGTTTCACAAACGCAAACGCACACACTTGTTTTATCACTTCAATGGCAGGGTCATGTTTCCACGGGCTTCGTTTGAGGAGGTCAAAGAGTAAATCTTTACCAGACCCTTCATCTTCATACAGGGCCCGAATGGATTCTGAAGAGGAGAAGATGGAAAGGAAGAGATTTGATAGCACAGAATCTTGGTCCATGATATTGGACTCAGTGGAGACATGGGAAGCTTCAAAGGAGGAGCAGGGGCAGGAGCAAGAGGAATGGAATGCAGACTTATCACAGCTTTTCATAGGTAACAAGTTTGCTTCTGGGGCTCACAGTAGAATCTACCGTGGAATCTACAAGCAGAAAGCCGTTGCTGTCAAAATGGTGAGGATTCCAGCGCAGGATGAGGAGAAAAGAGCCTTACTAGAACAGCAATTTAACTCCGAAGTGGCTTTACTTTCACGTCTCTTTCATCATAACATAGTGCAGTTTATTGCAGCATGTAAAAAACCGCCAGTGTATTGTATCATAACAGAATACATGTCACAAGGAACTCTGAGGATGTATCTGAACAAAAAAGAGCCATACTCCCTTTCTATGGAAACAATACTAAGGCTAGCTCTTGACATATCTAGGGGTATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGATCTCAAGTCAAATAACTTGCTTCTCAATGATGATATGAGGGTTAAGGTGGCAGATTTTGGCACATCGTGTCTTGAAACACGATGCCGAGAAACCAAAGGAAACATGGGAACATATCGTTGGATGGCACCAGAAATGATTAAGGAAAAGCCTTATACTCGCAAAGTCGATGTGTACAGTTTTGGTATTGTTCTTTGGGAGCTCACAACCGCTCTACTTCCCTTCCAAGGAATGACCCCAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAATGAAAGGCCTCCTTTGCCAGCTAGTTGTCAGCCAGCACTAGCACATCTGATAAAGCGTTGCTGGTCAGCAAACCCCTCGAAAAGGCCAGATTTCTGCGATATTGTGTCCACTTTGGAGAAGTACGATGAGTGTGTGAAAGAGGGCCTACCGCTAACTCATCATTCAGGACTAGTAAGCCGAAATGTAATTATTGAACGCCTAAAAGGCTGTGTATCCATGAGCTCCTCCATACCTGTACATGCTTGA 1233 0.4412 MLQNQRSGGKLLLTVSFDSKGFTNANAHTCFITSMAGSCFHGLRLRRSKSKSLPDPSSSYRARMDSEEEKMERKRFDSTESWSMILDSVETWEASKEEQGQEQEEWNADLSQLFIGNKFASGAHSRIYRGIYKQKAVAVKMVRIPAQDEEKRALLEQQFNSEVALLSRLFHHNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSMETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDDMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSANPSKRPDFCDIVSTLEKYDECVKEGLPLTHHSGLVSRNVIIERLKGCVSMSSSIPVHA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1821 410 MobiDBLite consensus disorder prediction 61 75 - -
Apr1g1821 410 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 43 398 - -
Apr1g1821 410 SMART serkin_6 113 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1821 410 MobiDBLite consensus disorder prediction 49 75 - -
Apr1g1821 410 Gene3D Transferase(Phosphotransferase) domain 1 196 382 - -
Apr1g1821 410 ProSiteProfiles Protein kinase domain profile. 113 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1821 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Apr1g1821 410 Gene3D Phosphorylase Kinase; domain 1 101 195 - -
Apr1g1821 410 Pfam Protein tyrosine and serine/threonine kinase 115 367 IPR001245 GO:0004672|GO:0006468
Apr1g1821 410 CDD STKc_MAP3K-like 120 367 - -
Apr1g1821 410 SUPERFAMILY Protein kinase-like (PK-like) 87 367 IPR011009 -
Apr1g1821 410 PRINTS Tyrosine kinase catalytic domain signature 191 204 IPR001245 GO:0004672|GO:0006468
Apr1g1821 410 PRINTS Tyrosine kinase catalytic domain signature 229 247 IPR001245 GO:0004672|GO:0006468
Apr1g1821 410 PRINTS Tyrosine kinase catalytic domain signature 275 285 IPR001245 GO:0004672|GO:0006468
Apr1g1821 410 PRINTS Tyrosine kinase catalytic domain signature 294 316 IPR001245 GO:0004672|GO:0006468
Apr1g1821 410 PRINTS Tyrosine kinase catalytic domain signature 338 360 IPR001245 GO:0004672|GO:0006468
Apr1g1821 410 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 43 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1821 Apr-Chr1 27925089 27930430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1821 35 410 MAP Kinase Kinase Kinase AT1G62400 79.241 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Apr1g1821 PK_Tyr_Ser-Thr 6.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1821 - - aprc:113845847 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2068 9 28924554 28928985 Apr1g1821 1 27925089 27930430 PCT