Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1803 ATGGCTCTTACCCGTTTTGTTCTTTCACTCTTTCTCGTTGAGTTTGTGTCGTTCTCTTTGATCTTTGCTGCTCTTCCTCTTGCCTTGGCCAACACTGACCCTTCTGATGTACAAGCTCTTGAGGTGATGTACAACGCGTTAAATAGTCCAACTCAGCTAACGGGTTGGAAAATTGGTGGTGGTGATCCATGCGGAGAGTCGTGGAAAGGGATAACATGTGAGGGTTCAGCCGTTGTTTCCATTGAGCTCTCAGGTTTAGGACTCGATGGGACTTTGGGATACCTGCTTTCAGACCTTATGTCACTGAGAAAGCTTGACTTAAGTGACAACAAGATTCATGATACAATTCCCTACCAATTGCCACCGAATCTTACAAGCTTGAATCTTGCCAGAAATAACTTATCTGGAAATCTTCCTTATTCTGTTTCTGCCATGGTTTCACTCAATTATCTGAATTTGAGCAATAATGCGCTCTCCCAGTCAATTGGCGATATTTTTGCTAGTCTTTCTGATCTTGGCACCCTGGATTTATCAGTCAATAATTTCTCTGGCGATCTTCCTCCTTCTGTTGGTTCATTGTCCAATCTTTCCTCTCTGTTCTTGCAGAAGAACCAGTTAACTGGATCTCTTAGTGTTCTTGTTGGTTTGCCTTTGGATATTTTAAATGTTGCAAACAATAACTTCAGTGGATGGATACCTCGTGAGCTTAGTTCCATCCATAGTTTCATATATGATGGAAATTCTTTTGAGAACGGTCCTTCTCCTATTCCACCAGCTTCTACTTCACCTCCTCCCAATGGATCTCATAACAGTCATCATCATTCTGGATCTGGTTCGCATAATAAAGCACAAGGTTCTGAGAATGAAAATTCTGATGGCCACAAGGGTTTGGCAGCAGGGGCTGTGGTAGGCATTATTTTAGGTTCAGTATTGGTGGCTGTTATTTTGCTGCTTGCTCTTGTTTTCTGCATCCGAAAACAAAAAGGAAAGAAAAAGAGTGCAAGAACTTTAAGTGGGAGCTTTCCCCGTGGAATTAATAATGGTGAATCCCCTTTCTTTTTGCTTTTTGTTTCAAGATATATTTTAATGGTGAGTCCTGACCAGTTTAGCTTTTCATTTGGGTTTATACTTGCAGTAACTCCACCTATGCAAGAGCAGAGGGTAAAAAGTGCTGCAGTTATCACAGATCTCAAGCCTCTTCCTGTAGAGAATGTGGCAGTTGAGAGGGTACCTGTAAAAAGTGGATCTGTAAAGCAGATGAAGTCCCCTATAACTTCTACATCATACACCGTTGCTTCTCTTCAAAGTGCAACAAATAGCTTTAGTCAAGAATTTATTATTGGTGAAGGTTCTCTTGGCCGTGTTTACAAGGCTGATTTCCCAAATGGGAAGATAATGGCTGTTAAGAAGATTGACAATTCAGCACTGTCATTACAAGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCACGCTTGAGGCACCCAAACATTGTGACATTGGCTGGATATTGTACAGAGCATGGCCAACGACTTCTAGTTTATGAGTATATAGGAAATGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGCAAGGCTTTGTCTTGGAATGCCCGCGTTCGCATAGCACTTGGCACGGCCCGAGCTTTAGAGTACTTGCATGAAGTGTGCTTGCCTTCTGTTGTACATAGAAATTTCAAATCAGCAAATATATTACTTGACGAGGAGCTCAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTTTGACACCAAACACTGAGCGGCAGGTATCAACTCAGATGGTTGGTTCATTTGGTTATAGTGCTCCTGAATTTGCATTGTCAGGGGTATACACTGTAAAAAGTGATGTATACAGCTTTGGGGTGGTTATGCTGGAACTACTGACTGGTCGGAAGCCACTTGACAGTTCGCGGGTTAGATCAGAGCAGTCGCTTGTGAGGTGGGCTACACCCCAACTCCATGATATCGATGCCTTGGCCAAAATGGTTGATCCTACATTGAACGGCATGTATCCAGCAAAGTCGCTGTCACGCTTTGCCGATATCATTGCTCTCTGTGTTCAGCCGGAACCTGAATTTCGACCCCCAATGTCTGAAGTGGTGCAAGCATTGGTACGGTTAGTACAAAGAGCAAGTGTGGTTAAAAGGCGACCCAGTGACGAATCTGGTTTTGGTCACAAGACTCCAGACCATGAGGCCATAGACATGTCATTTTAA 2250 0.4293 MALTRFVLSLFLVEFVSFSLIFAALPLALANTDPSDVQALEVMYNALNSPTQLTGWKIGGGDPCGESWKGITCEGSAVVSIELSGLGLDGTLGYLLSDLMSLRKLDLSDNKIHDTIPYQLPPNLTSLNLARNNLSGNLPYSVSAMVSLNYLNLSNNALSQSIGDIFASLSDLGTLDLSVNNFSGDLPPSVGSLSNLSSLFLQKNQLTGSLSVLVGLPLDILNVANNNFSGWIPRELSSIHSFIYDGNSFENGPSPIPPASTSPPPNGSHNSHHHSGSGSHNKAQGSENENSDGHKGLAAGAVVGIILGSVLVAVILLLALVFCIRKQKGKKKSARTLSGSFPRGINNGESPFFLLFVSRYILMVSPDQFSFSFGFILAVTPPMQEQRVKSAAVITDLKPLPVENVAVERVPVKSGSVKQMKSPITSTSYTVASLQSATNSFSQEFIIGEGSLGRVYKADFPNGKIMAVKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCTEHGQRLLVYEYIGNGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFGHKTPDHEAIDMSF* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1803 749 MobiDBLite consensus disorder prediction 265 286 - -
Apr1g1803 749 Gene3D Transferase(Phosphotransferase) domain 1 519 736 - -
Apr1g1803 749 SUPERFAMILY Protein kinase-like (PK-like) 419 715 IPR011009 -
Apr1g1803 749 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Apr1g1803 749 SUPERFAMILY L domain-like 33 241 - -
Apr1g1803 749 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Apr1g1803 749 Gene3D Ribonuclease Inhibitor 33 298 IPR032675 -
Apr1g1803 749 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 30 745 - -
Apr1g1803 749 Pfam Protein kinase domain 444 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1803 749 PANTHER OS01G0253100 PROTEIN 30 745 IPR045271 GO:0004714|GO:0006468
Apr1g1803 749 ProSiteProfiles Leucine-rich repeat profile. 101 122 IPR001611 GO:0005515
Apr1g1803 749 MobiDBLite consensus disorder prediction 253 293 - -
Apr1g1803 749 Gene3D Phosphorylase Kinase; domain 1 404 518 - -
Apr1g1803 749 ProSiteProfiles Protein kinase domain profile. 441 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1803 749 CDD STKc_IRAK 447 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1803 Apr-Chr1 27724543 27730210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1803 145 749 Strubbelig Receptor Gene Family AT4G22130 67.657 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Apr1g1803 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1803 - - aprc:113869285 1370.53