Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1773 ATGTCTTGCTCCAATCTCACAATGTTGGTGTCTTCCAAACCTTCTCTATCTGATGCCTCCAACCTCTCCTTCCGTTCTGTCTTCAACCCTTTTCAGCTTCCTTCACAAAATTCATCTTCCTTCACCCCTTCAAGATCCTCTATCACTCCAATTCAGTGTGGCCTTAGAGAGCTCAGAACCCGTATTGATTCTGTGAAAAACACCCAGAAAATCACAGAGGCAATGAAGCTTGTGGCTGCTGCAAAAGTCAGAAGAGCTCAAGAAGCTGTTGTTAATGGCAGGCCCTTCTCAGAGACCCTTGTTGAAGTCCTTTACAACATCAATGAGCAGCTCCAAACTGAAGATATTGATGTTCCTCTCACTAAGGTTAGGCCTGTGAAGAAGGTGGCCTTAGTTGTTTGCACTGGAGATAGAGGTCTTTGTGGTGGTTTTAACAATGCAATCATCAAGAAAGCTGAGACTAGAATTGCTGAGTTGAAGGAACTTGGCCTTGAATACACTGTTATCAGTGTTGGCAAAAAGGGTAACTCTTATTTCATTCGTAGACCTTACATACCGGTTGATAGGTTTCTTGAAGGTGGTACACTTCCCACTGCTAAAGAGGCTCAAGCAATTGCTGATGATGTTTTCTCACTGTTTGTGAGTGAAGAGGTTGATAAAGTGGAACTTTTGTATACTAAGTTTGTGTCATTAGTGAAGTCAGATCCTGTAATTCACACCTTGCTTCCACTCTCACCAAAAGGAGAGATATGTGATGTGAATGGTATTTGTGTGGATGCTGCTGAGGATGAGTTCTTCAGGTTAACAACAAAAGAAGGAAAGTTAACTGTGGAAAGAGACACAGTGAGGACTCAAACAGCAGATTTCTCTCCAATTTTGCAATTTGAGCAGGACCCAGCTCAGATCCTTGATGCACTTTTGCCTCTATATTTGAACAGCCAAATATTGAGAGCATTGCAGGAATCACTTGCTAGTGAGCTTGCTGCTAGAATGAGTGCCATGAGCAATGCAACTGATAATGCTGTAGAGTTGAAGAAGAACTTGTCCATTATCTACAATAGGGAACGTCAGGCTAAGATCACTGGTGAAATACTGGAAATTGTGGCTGGTGCCAATGCCTTGCAATAG 1128 0.4255 MSCSNLTMLVSSKPSLSDASNLSFRSVFNPFQLPSQNSSSFTPSRSSITPIQCGLRELRTRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDIDVPLTKVRPVKKVALVVCTGDRGLCGGFNNAIIKKAETRIAELKELGLEYTVISVGKKGNSYFIRRPYIPVDRFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVNGICVDAAEDEFFRLTTKEGKLTVERDTVRTQTADFSPILQFEQDPAQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAVELKKNLSIIYNRERQAKITGEILEIVAGANALQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1773 375 Gene3D ATP synthase, gamma subunit, helix hairpin domain 270 374 - -
Apr1g1773 375 Gene3D ATP synthase, gamma subunit, helix hairpin domain 53 122 - -
Apr1g1773 375 ProSitePatterns ATP synthase gamma subunit signature. 360 373 IPR023632 -
Apr1g1773 375 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 54 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
Apr1g1773 375 Pfam ATP synthase 55 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
Apr1g1773 375 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 374 - -
Apr1g1773 375 Gene3D - 123 245 - -
Apr1g1773 375 Hamap ATP synthase gamma chain [atpG]. 52 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
Apr1g1773 375 PRINTS ATP synthase gamma subunit signature 126 145 IPR000131 GO:0015986|GO:0045261|GO:0046933
Apr1g1773 375 PRINTS ATP synthase gamma subunit signature 219 236 IPR000131 GO:0015986|GO:0045261|GO:0046933
Apr1g1773 375 PRINTS ATP synthase gamma subunit signature 321 340 IPR000131 GO:0015986|GO:0045261|GO:0046933
Apr1g1773 375 PRINTS ATP synthase gamma subunit signature 352 373 IPR000131 GO:0015986|GO:0045261|GO:0046933
Apr1g1773 375 CDD F1-ATPase_gamma 55 371 IPR000131 GO:0015986|GO:0045261|GO:0046933
Apr1g1773 375 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 54 374 IPR035968 GO:0015986|GO:0045261|GO:0046933
Apr1g1773 375 PANTHER ATP SYNTHASE GAMMA CHAIN 1 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1773 Apr-Chr1 27454672 27456993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1773 28 375 Primary Pumps ATPases AT1G15700 71.549 0.0 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1773 K02115 - gmx:100037480 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1773 1 27454672 27456993 Apr1g1773 1 27454672 27456993 ECH