Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1760 ATGGGTTGCTTCCCATGCTGTAAGTCAGATGTTGAAACATCCTCTTTCAGAGCCTCCAGGAAAATTTCCAAAGGCAGGAAAACATTCAAATCATTAGCGGCTGCTATGTCACTTAAAACAGGTAGCAGCAGGCATAGACAAATAGATGCAGAGATAAGAAAATATGGAACTGCAAAAAATGATGTTAAAATATTCACATATGAAGATGTCTCTGAAGCAACAAACAACTTCAGTGCTGATTGCCTGGTAGGAGAAGGTGGATTTGGAAATGTCTACAAAGGATACTTGAAAAGTGTTGAACAAACTGTAGCTGTGAAAGTACTGAACAGGGAAGGAAACCAAGGAACACGAGAATTTTTTGCAGAGATTTTGACGTTAAGCATGGTGCAACACCCAAACCTTGTTAGGCTCATTGGTTATTGCGCAGACGGCGATCATAGGATTCTAGTTTATGAATTCATGGCCAATGGGAGTTTGGAAAATCACCTTCTAGATATAGGTGCAGATAAGGAACCATTGGATTGGAAGACTAGAATGAAAATAGCTGAGGGAGCAGCTAAGGGACTTGAACATTTGCATAACAATGCAAATCCACCAATTATATACCGTGATTTTAAATCATCTAATATCCTATTAGATGAAAATTTTAATCCAAAGCTCTCTGATTTTGGACTTGCAAAGATTGGTCCAAAAGAAGGCCAGGACTTTGTGTCAACAAGGGTGATGGGGACCTTTGGCTATTGTGCACCAGAGTATGCTGCAACGGGTCAGCTAACAACAAAGTCGGATATTTACAGTTTTGGGGTCGTGTTTTTGGAAATAATTACGGGTAGGAGAGTATTTGACACTGGAAGAACCACAGAAGAGCAAAACTTGATTGACTGGGCACAACCTTTGTTTAAAGACAGAACAAAGTTCACTCTGATGGCTGATCCTTTGCTTAAAGGTCAATTCCCTGTGAAGGGTCTGTTTCAAGCTCTTGCAGTGGCAGCAATGTGTCTCCAAGAGGAAGCTGAAACACGGCCTTACATGGACGATGTTGTAACTGCACTTGCGCATCTAGCAGTGCACAAGGTTGGAGAAAAAGACATAGCTGGTGAATCTATAAAGATTGCTGGGCATGTTGAATCATTCAGAGCTGCAAGTTCAATTGGATCTGAAAGGGCGTAG 1170 0.412 MGCFPCCKSDVETSSFRASRKISKGRKTFKSLAAAMSLKTGSSRHRQIDAEIRKYGTAKNDVKIFTYEDVSEATNNFSADCLVGEGGFGNVYKGYLKSVEQTVAVKVLNREGNQGTREFFAEILTLSMVQHPNLVRLIGYCADGDHRILVYEFMANGSLENHLLDIGADKEPLDWKTRMKIAEGAAKGLEHLHNNANPPIIYRDFKSSNILLDENFNPKLSDFGLAKIGPKEGQDFVSTRVMGTFGYCAPEYAATGQLTTKSDIYSFGVVFLEIITGRRVFDTGRTTEEQNLIDWAQPLFKDRTKFTLMADPLLKGQFPVKGLFQALAVAAMCLQEEAETRPYMDDVVTALAHLAVHKVGEKDIAGESIKIAGHVESFRAASSIGSERA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1760 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Apr1g1760 389 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Apr1g1760 389 Gene3D Phosphorylase Kinase; domain 1 61 153 - -
Apr1g1760 389 SUPERFAMILY Protein kinase-like (PK-like) 62 349 IPR011009 -
Apr1g1760 389 PANTHER OS07G0668900 PROTEIN 1 387 - -
Apr1g1760 389 Gene3D Transferase(Phosphotransferase) domain 1 154 371 - -
Apr1g1760 389 ProSiteProfiles Protein kinase domain profile. 77 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1760 389 CDD STKc_IRAK 83 351 - -
Apr1g1760 389 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 387 - -
Apr1g1760 389 Pfam Protein kinase domain 82 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1760 Apr-Chr1 27296499 27298674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1760 1 360 Glycoside Hydrolase AT3G07070 54.918 3.53e-140 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr1g1760 Pkinase 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1760 - - gmx:100305361 671.003