Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1753 ATGATCTCTTCGGTCAAGTACACAGCATCGTCTCTCACTTGTTCTGCTTTCTCAAGCAGAAAGCTTCCTGCTCCAAGGTCTCAACTTTTCACATCACCCACAATTCAAAATGCTGAACAAAACATGGGTCCCTCTCTGCTGTGTAATTCCCAGAAACCTCTCTACCTTAAATCCACTGAGAACTTGGCATTGATGAGAAGAAGGAACGTGACTGAGTTCCAGGCCTATGAAGCAGACAGGTCAAGGCCACTAGAGATTAACATTGAGTTGCCAGGTGAAGAGGCTGCTCAGAGGCTCAAGATTGGGTTATATTTTGCTACTTGGTGGGCTTTGAATGTGGTCTTCAACATTTACAACAAGAAGGTTTTGAATGCTTTTCCCTACCCATGGCTCACTTCTACTTTGTCCCTCGCTGCTGGCTCTCTCATGATGTTAATCTCGTGGGCCACAAGGGTTGCTGATGTCCCAAAAGTTAACTTGGACTTCTGGAAGGCCCTCTTTCCTGTTGCGGTGGCACACACAATTGGGCATGTTGCTGCCACTGTGAGCATGTCCAAAGTTGCTGTTTCATTCACTCACATCATCAAGAGTGGAGAGCCCGCTTTCAGTGTCCTGGTATCAAGGTTCTTGCTCGGAGAAGCATTCCCTATGCAGGTTTACTTCTCATTGTTACCAATTATTGGTGGTTGTGCACTAGCTGCTGTGACGGAGCTCAATTTCAATATGATTGGCTTTATGGGGGCTATGATATCAAACTTGGCATTTGTATTCCGGAATATATTCTCAAAGAAAGGGATGAAAGGAATGTCTGTTAGTGGAATGAACTACTATGCTTGTCTTTCCATGTTGTCTCTATTAATTCTCACACCTTTTGCCATTGCTGTGGAGGGTCCCAAGGTATGGGCTGCAGGCTGGCAAACAGCTGTGTCTCAGATTGGTCCCAATTTTGTATGGTGGGTAGCTGCCCAGAGTGTCTTCTACCACTTGTATAATCAAGTCTCTTACATGTCTCTTGATCAGATTTCTCCCTTAACATTTAGTATTGGCAACACAATGAAGAGAATTTCTGTAATTGTCTCTTCCATCCTTATCTTTCACACTCCAGTTCAGCCCATCAATGCTCTCGGTGCTGCCATTGCAATTCTTGGCACCTTCCTATATTCACAGGCTAAACAGTAA 1179 0.4461 MISSVKYTASSLTCSAFSSRKLPAPRSQLFTSPTIQNAEQNMGPSLLCNSQKPLYLKSTENLALMRRRNVTEFQAYEADRSRPLEINIELPGEEAAQRLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRVADVPKVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMQVYFSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSMLSLLILTPFAIAVEGPKVWAAGWQTAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPVQPINALGAAIAILGTFLYSQAKQ* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1753 392 PANTHER SOLUTE CARRIER FAMILY 35 36 391 - -
Apr1g1753 392 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 391 IPR004696 GO:0016021|GO:0022857|GO:0055085
Apr1g1753 392 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 36 391 - -
Apr1g1753 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 291 389 - -
Apr1g1753 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 235 - -
Apr1g1753 392 Pfam Triose-phosphate Transporter family 99 388 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1753 Apr-Chr1 27231569 27234501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1753 35 392 Antiporters AT1G61800 80.447 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1753 K15283 - gmx:100804205 698.738