Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1703 ATGCAACTAATTTATAGTTCCCATCCACCATTGATCTTTCCTTTGTGTTTTTTCCTTCAGGCCTTGTTTCTAGCAACTTTGCTTCTCTTTCCAAACATGGGTTGTGTCCATGGCAAGTGTTGTACTCGCTACCCTCCACCATCAGTGGGTGGTTCAAGGGACTATCGAGAACTTGGTCCTTTTTGTGCCCAAAGGAAGCACATTCTCACTCAGACTTCACTTCAGTTTGTTCCTGTTCCTTCCCATAACTTCACTTTGGAATACTCTGTCCTCACTCAGAGAGGATACTACCCTGACTCACCTGATAAAGAAAACCAAGATAGTTTCTGCATTAGGACACAGTTTCAAGGTAATCCAAGTGTTCATTTCTTTGGCGTTTATGATGGGCATGGCGAATTTGGTTCCCAGTGTTCAAACTTTGTTAAGGATAGGTTGGTAGAAAATTTGTCTAGTGACACTGCATTGTTGGAGGATCCTGTTAAGGCCTACACTTCTGCGTTCTTGAAAACAAATGATGACTTGCATAATAATGAGATTGATGATTCTATGAGTGGCACTACTGCAATTACGGTGCTGGTTATTGGAGACACCCTTTATGTTGCTAATGCTGGTGATTCTAGAGCTGTGCTAGCTGTTAAGGATGGGAACCGTGTTGTTGCCGAGGACTTATCCTCTGATCAGACACCATTTAGGAGAGACGAGTATGAGAGAGTGAAACTTTGTGGGGCAAGAGTGTTGAGTGTTGATCAGGTGGAAGGGCATAAAGATCCGGATATTCAGACTTGGGGCGATGAAGAAACTCAGGGAGATGATCCTCCTAGGTTGTGGGTTCAGAATGGGATGGTTCCTGGGGCTGCTTTTACAAGGAGTGTAGGGGATAAGTTGGCTGAGACTATTGGTGTCATTGCTGTTCCGGAGGTGTCAACGGTTCAGCTTACACCTAATCATCTTTTCTTTGTTGTTGCAAGTGATGGCGTATTTGAGTTCCTATCCAGCCAAACTGTTGTTGATATGGCAGCAAGTTATTCAGATCCTCGTGATGCATGTGCTGCCATTGCTGGAGAGTCTTATAAACTATGGTTGGAACATGAGGGCCGAACAGATGATATAACCATTATCATTGTTCAGATCAAAGGCCTGTCTAATTCAGGTACATCTGGACTAAGATCGGGTGAAATCAATGCCAGTACTGTAACGAGGACCAAGAGCAAGAGAGGAAAGGGAGCATCTGAGATCTCTGTAACTTCTGAGTTAGATGTTTATCGTTCTGTCAGGAACGGTTTCTCTGATTTACAATCCTGTCCGCAGCATGTGGTCTCAACAAGAAGTCCAGCCATAGTGGTCCCCTCTCCAGCATGTCAAAGACCAATTGATGATTGGAGAGAGAGGCTTTATGGAAGCTTCACCCAGTCTCCTTGTACTTTTCTCCTAGCTGGTTTCTGGTTTGAAGTGCATTCTTGGCAGCTGAACATCTTTTTTCAGAATGTAGAGTAG 1494 0.4404 MQLIYSSHPPLIFPLCFFLQALFLATLLLFPNMGCVHGKCCTRYPPPSVGGSRDYRELGPFCAQRKHILTQTSLQFVPVPSHNFTLEYSVLTQRGYYPDSPDKENQDSFCIRTQFQGNPSVHFFGVYDGHGEFGSQCSNFVKDRLVENLSSDTALLEDPVKAYTSAFLKTNDDLHNNEIDDSMSGTTAITVLVIGDTLYVANAGDSRAVLAVKDGNRVVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGHKDPDIQTWGDEETQGDDPPRLWVQNGMVPGAAFTRSVGDKLAETIGVIAVPEVSTVQLTPNHLFFVVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSNSGTSGLRSGEINASTVTRTKSKRGKGASEISVTSELDVYRSVRNGFSDLQSCPQHVVSTRSPAIVVPSPACQRPIDDWRERLYGSFTQSPCTFLLAGFWFEVHSWQLNIFFQNVE* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1703 497 Pfam Protein phosphatase 2C 105 352 IPR001932 -
Apr1g1703 497 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Apr1g1703 497 ProSiteProfiles PPM-type phosphatase domain profile. 87 377 IPR001932 -
Apr1g1703 497 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 66 458 - -
Apr1g1703 497 MobiDBLite consensus disorder prediction 254 273 - -
Apr1g1703 497 Gene3D - 79 379 IPR036457 -
Apr1g1703 497 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 66 458 - -
Apr1g1703 497 CDD PP2Cc 103 377 IPR001932 -
Apr1g1703 497 SMART PP2C_4 83 375 IPR001932 -
Apr1g1703 497 MobiDBLite consensus disorder prediction 254 271 - -
Apr1g1703 497 SUPERFAMILY PP2C-like 76 379 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1703 Apr-Chr1 26711754 26715441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1703 33 382 PP2C-type Phosphatase Gene Family AT3G06270 71.714 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1703 - - aprc:113872580 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1703 1 26711754 26715441 Apr1g1703 1 26711754 26715441 ECH
Apr9g2178 9 29793493 29797192 Apr1g1703 1 26711754 26715441 PCT