Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1693 ATGAACGATGAACAACAATCACAAGCTTCCCAGAGCAATGGCGTCCACAAGATAGAAAAGAAACAAATAGCTGAAATGGAGAGAAATTCTTTTAGAGGCAGAAGACCACGACCCGGGTTTTCTGATTCATTTTCAAACATTGACATGACAGCTCTAGAAATTGAAGAGGGAGGTTCTCATGAGTACTCTCCTAGAGGGCACGAATCTGATACCCCAAGTTCAAGGGCCAGCACTTCTGATTCGGAGAGTCAAGGATCCTTAAGAAGCAATTCACCTAATAACAATAATCAGTGGCGTGGCTTCTTTAAATTATTGAAGAAAGGATCCCAAATGCCCTTCCAAACTTTTCATCCACTTAAAAATGTTCCAAAACTTACTAGAAGAAAGAGCAAAAGAATCAGGGAGGAGCTGATTCCATCTCTGAATTCACCGGCCCTTCAGTCATCTTTTGACAGTGAGTTTGCCTGCTTCAAATCTTCTTGGAAAAATTTCACTCTCTCTGAGATCCAGACTGCAACCAACCACTTTAGCCACGATAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTACTTGGGCAAATGTGAAGATGGAAATTTTGTTGCCATTAAACGGTTGACAAGAGGGACCCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGAATTATAGTGCATGTGGACCACCCCAATATTGCTAGATTGATTGGATATGGTGTTGAAGGGGGAATGTTTCTAGTTCTTCAATTGTCTCCACATGGTAGCTTGTCATCCATACTTTATGGACCTAGAGAAAAACTGAATTGGAGCGTTAGATTTAAGATTGCTTTGGGAACTGCTGAAGGCCTTCGCTATCTGCACGAGGGATGTCAAAGAAGAATCATTCACAAAGATATCAAGGCTTCTAATATACTGCTCTCGGAGGATTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGATCAATGGACTCACCATACTGTGTCAAAAGTGGAAGGCACATTTGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGTGTGCTATTATTGGAACTCATTACTGGTAGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTGTCTGCAGATAAAATCAAAGATCTTGTGGATCCGGTTTTGGCTGATGCTTATGATGAAGAACAGATGAAGCTTGTAATCTTAACAGCTTCTCAGTGTATAGACCAGTCTTCCATTCAACGACCGAATATGAGCCAGGTGGTACATATACTAAGAGGTGAAGAAGAGAGCTTGAGAAGCATGAAAGAACGGCAAAAGTCAAAACTTCAGAGGACATATTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACAAAGTTTTTGAATGAGAGGGATAAACATTTAGAGACTATTCTAGGCTCCTGCAACTCTCTTACAGAAGAAAGAAATAAAGACTAG 1512 0.4107 MNDEQQSQASQSNGVHKIEKKQIAEMERNSFRGRRPRPGFSDSFSNIDMTALEIEEGGSHEYSPRGHESDTPSSRASTSDSESQGSLRSNSPNNNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREELIPSLNSPALQSSFDSEFACFKSSWKNFTLSEIQTATNHFSHDNLIGEGGYAEVYLGKCEDGNFVAIKRLTRGTQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWSVRFKIALGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSADKIKDLVDPVLADAYDEEQMKLVILTASQCIDQSSIQRPNMSQVVHILRGEEESLRSMKERQKSKLQRTYSEELLDAEEYNSTKFLNERDKHLETILGSCNSLTEERNKD* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1693 503 SUPERFAMILY Protein kinase-like (PK-like) 161 461 IPR011009 -
Apr1g1693 503 MobiDBLite consensus disorder prediction 1 17 - -
Apr1g1693 503 PANTHER OS08G0249100 PROTEIN 34 479 - -
Apr1g1693 503 ProSiteProfiles Protein kinase domain profile. 176 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1693 503 MobiDBLite consensus disorder prediction 1 98 - -
Apr1g1693 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Apr1g1693 503 MobiDBLite consensus disorder prediction 69 98 - -
Apr1g1693 503 Gene3D Phosphorylase Kinase; domain 1 140 250 - -
Apr1g1693 503 ProSitePatterns Protein kinases ATP-binding region signature. 182 204 IPR017441 GO:0005524
Apr1g1693 503 Pfam Protein tyrosine and serine/threonine kinase 179 441 IPR001245 GO:0004672|GO:0006468
Apr1g1693 503 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 34 479 - -
Apr1g1693 503 MobiDBLite consensus disorder prediction 18 35 - -
Apr1g1693 503 SMART serkin_6 176 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1693 503 Gene3D Transferase(Phosphotransferase) domain 1 253 469 - -
Apr1g1693 503 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1693 Apr-Chr1 26611910 26615660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1693 147 445 Receptor kinase-like Gene Family AT1G53420 39.088 2.47e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Apr1g1693 PK_Tyr_Ser-Thr 8.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1693 - - gmx:100776081 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1693 1 26611910 26615660 Apr1g1693 1 26611910 26615660 ECH
Apr1g1693 1 26611910 26615660 Apr4g0757 4 6173486 6176626 ECH
Apr1g1693 1 26611910 26615660 Apr8g1475 8 23639163 23641701 ECH
Apr1g1693 1 26611910 26615660 Apr8g0191 8 1542698 1546185 ECH
Apr1g1693 1 26611910 26615660 Apr4g1111 4 9396713 9399875 ECH