Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g1693 | ATGAACGATGAACAACAATCACAAGCTTCCCAGAGCAATGGCGTCCACAAGATAGAAAAGAAACAAATAGCTGAAATGGAGAGAAATTCTTTTAGAGGCAGAAGACCACGACCCGGGTTTTCTGATTCATTTTCAAACATTGACATGACAGCTCTAGAAATTGAAGAGGGAGGTTCTCATGAGTACTCTCCTAGAGGGCACGAATCTGATACCCCAAGTTCAAGGGCCAGCACTTCTGATTCGGAGAGTCAAGGATCCTTAAGAAGCAATTCACCTAATAACAATAATCAGTGGCGTGGCTTCTTTAAATTATTGAAGAAAGGATCCCAAATGCCCTTCCAAACTTTTCATCCACTTAAAAATGTTCCAAAACTTACTAGAAGAAAGAGCAAAAGAATCAGGGAGGAGCTGATTCCATCTCTGAATTCACCGGCCCTTCAGTCATCTTTTGACAGTGAGTTTGCCTGCTTCAAATCTTCTTGGAAAAATTTCACTCTCTCTGAGATCCAGACTGCAACCAACCACTTTAGCCACGATAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTACTTGGGCAAATGTGAAGATGGAAATTTTGTTGCCATTAAACGGTTGACAAGAGGGACCCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGAATTATAGTGCATGTGGACCACCCCAATATTGCTAGATTGATTGGATATGGTGTTGAAGGGGGAATGTTTCTAGTTCTTCAATTGTCTCCACATGGTAGCTTGTCATCCATACTTTATGGACCTAGAGAAAAACTGAATTGGAGCGTTAGATTTAAGATTGCTTTGGGAACTGCTGAAGGCCTTCGCTATCTGCACGAGGGATGTCAAAGAAGAATCATTCACAAAGATATCAAGGCTTCTAATATACTGCTCTCGGAGGATTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGATCAATGGACTCACCATACTGTGTCAAAAGTGGAAGGCACATTTGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGTGTGCTATTATTGGAACTCATTACTGGTAGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTGTCTGCAGATAAAATCAAAGATCTTGTGGATCCGGTTTTGGCTGATGCTTATGATGAAGAACAGATGAAGCTTGTAATCTTAACAGCTTCTCAGTGTATAGACCAGTCTTCCATTCAACGACCGAATATGAGCCAGGTGGTACATATACTAAGAGGTGAAGAAGAGAGCTTGAGAAGCATGAAAGAACGGCAAAAGTCAAAACTTCAGAGGACATATTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACAAAGTTTTTGAATGAGAGGGATAAACATTTAGAGACTATTCTAGGCTCCTGCAACTCTCTTACAGAAGAAAGAAATAAAGACTAG | 1512 | 0.4107 | MNDEQQSQASQSNGVHKIEKKQIAEMERNSFRGRRPRPGFSDSFSNIDMTALEIEEGGSHEYSPRGHESDTPSSRASTSDSESQGSLRSNSPNNNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREELIPSLNSPALQSSFDSEFACFKSSWKNFTLSEIQTATNHFSHDNLIGEGGYAEVYLGKCEDGNFVAIKRLTRGTQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWSVRFKIALGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSADKIKDLVDPVLADAYDEEQMKLVILTASQCIDQSSIQRPNMSQVVHILRGEEESLRSMKERQKSKLQRTYSEELLDAEEYNSTKFLNERDKHLETILGSCNSLTEERNKD* | 504 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g1693 | 503 | SUPERFAMILY | Protein kinase-like (PK-like) | 161 | 461 | IPR011009 | - | |
Apr1g1693 | 503 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Apr1g1693 | 503 | PANTHER | OS08G0249100 PROTEIN | 34 | 479 | - | - | |
Apr1g1693 | 503 | ProSiteProfiles | Protein kinase domain profile. | 176 | 448 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g1693 | 503 | MobiDBLite | consensus disorder prediction | 1 | 98 | - | - | |
Apr1g1693 | 503 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 295 | 307 | IPR008271 | GO:0004672|GO:0006468 | |
Apr1g1693 | 503 | MobiDBLite | consensus disorder prediction | 69 | 98 | - | - | |
Apr1g1693 | 503 | Gene3D | Phosphorylase Kinase; domain 1 | 140 | 250 | - | - | |
Apr1g1693 | 503 | ProSitePatterns | Protein kinases ATP-binding region signature. | 182 | 204 | IPR017441 | GO:0005524 | |
Apr1g1693 | 503 | Pfam | Protein tyrosine and serine/threonine kinase | 179 | 441 | IPR001245 | GO:0004672|GO:0006468 | |
Apr1g1693 | 503 | PANTHER | RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 | 34 | 479 | - | - | |
Apr1g1693 | 503 | MobiDBLite | consensus disorder prediction | 18 | 35 | - | - | |
Apr1g1693 | 503 | SMART | serkin_6 | 176 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g1693 | 503 | Gene3D | Transferase(Phosphotransferase) domain 1 | 253 | 469 | - | - | |
Apr1g1693 | 503 | MobiDBLite | consensus disorder prediction | 54 | 68 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g1693 | Apr-Chr1 | 26611910 | 26615660 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr1g1693 | 147 | 445 | Receptor kinase-like Gene Family | AT1G53420 | 39.088 | 2.47e-68 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Apr1g1693 | PK_Tyr_Ser-Thr | 8.5e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g1693 | - | - | gmx:100776081 | 849.736 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr1g1693 | 1 | 26611910 | 26615660 | Apr1g1693 | 1 | 26611910 | 26615660 | ECH | |
Apr1g1693 | 1 | 26611910 | 26615660 | Apr4g0757 | 4 | 6173486 | 6176626 | ECH | |
Apr1g1693 | 1 | 26611910 | 26615660 | Apr8g1475 | 8 | 23639163 | 23641701 | ECH | |
Apr1g1693 | 1 | 26611910 | 26615660 | Apr8g0191 | 8 | 1542698 | 1546185 | ECH | |
Apr1g1693 | 1 | 26611910 | 26615660 | Apr4g1111 | 4 | 9396713 | 9399875 | ECH |