Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1659 ATGTTACCCATGTTTCGTTACTGTCGCAAAACCTTGTTCAGCCTCAACCACAACCGTAACCTCAATCCCACACCATTCTATTTTCTTCAACCTTCTCTGTCTTTCATTTCCTCTTCCGAACAACACTCTTTTACACTGAACTACCTCATCAACATTTGTGGCTTCTCCCCAGAAACAGCTTCCAAACTCTCCAACCGAATTCGTCTCGTTAACTCAGAGAGGCCCGACTCAGTCCTTGCCTTGTTCAGAACCCATGGCTTCTCAGACGCTGAGATACGTAGGGTCATCGATGGCTACCCAAGGATACTCACTTCTAGATCCAACAAGACCATTCTTCCAAAACTCAACTTTCTTCTCTCAAAGGGTGCTTCAAGTTCCGACCTTGTTCATATCGTTACTAAAAATCCCAGGTTCTTGTACTTTGGCTTGCAAAATTCCTTAACCCCACGTTATTATTTCATCAAAAGTTTCCTTCATTCTGATCATTCAACTTTGCTCTCGATAAAATCCTGCCCTGGAATTATTTACTCTAAGAACCCATCACATAATGTTCAGGTTCTGCTTGAAAATGGGGTCCCTGAATCCAAGGTTGCTATTAGCCTTCGTTATTGGCCTTCTTCTCTCGTTGTGTTTCCTCCTATCTTTAAGAATGCAGTGGAAGAAGCGAAGGAAATGGAATTCAGTCCCAACAATACAGTATTCATTGTAGCACTGCGTGCTAAGCTTATGAGAAAATCCTTGTGGCAAAGAAAGGTTGATTTGTATAAGAAATGGGGTTGGTCTGAAGAAGATGTTATTTCAGCATTTGTGAGGTATCCATGGTGCATGTTGGCATCTGAGGCTAAAATTGAGGCAATGATGGAGTACTTTGTCAACCACTTGGGTTGGAAGTCTCATATGCTTGCCCAACAACCAGTGCTTATTATGATGAGTGTGGAAAAAAGACTTATTCCCAGGGCTTTTGTCTTGCAGTTTCTTCAGTCCAAAGGTTTGATTAAGGATGTTAATTTGGCCGGGGCTTTTAAGGTTGCTGAAAAGACGTTCTTGAAGAAATATGTGAATTGCTTTGAGAAGGAAGCTTCTCAGCTGTTGAAGCTGTACGAAGAAAGAAGAGATCCTTCAAGATAA 1128 0.4176 MLPMFRYCRKTLFSLNHNRNLNPTPFYFLQPSLSFISSSEQHSFTLNYLINICGFSPETASKLSNRIRLVNSERPDSVLALFRTHGFSDAEIRRVIDGYPRILTSRSNKTILPKLNFLLSKGASSSDLVHIVTKNPRFLYFGLQNSLTPRYYFIKSFLHSDHSTLLSIKSCPGIIYSKNPSHNVQVLLENGVPESKVAISLRYWPSSLVVFPPIFKNAVEEAKEMEFSPNNTVFIVALRAKLMRKSLWQRKVDLYKKWGWSEEDVISAFVRYPWCMLASEAKIEAMMEYFVNHLGWKSHMLAQQPVLIMMSVEKRLIPRAFVLQFLQSKGLIKDVNLAGAFKVAEKTFLKKYVNCFEKEASQLLKLYEERRDPSR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1659 375 PANTHER OS04G0637500 PROTEIN 37 370 - -
Apr1g1659 375 Pfam mTERF 79 198 IPR003690 GO:0003690|GO:0006355
Apr1g1659 375 Pfam mTERF 181 349 IPR003690 GO:0003690|GO:0006355
Apr1g1659 375 PANTHER CGI-12 PROTEIN-RELATED 37 370 IPR003690 GO:0003690|GO:0006355
Apr1g1659 375 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Apr1g1659 375 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Apr1g1659 375 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Apr1g1659 375 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Apr1g1659 375 Gene3D Transcription termination factor 3, mitochondrial 168 366 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1659 Apr-Chr1 26274061 26275504 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr1g1659 mTERF 8.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1659 K15032 - gmx:102663105 455.677