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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Apr1g1655
ATGATTTCCGAGGTTTCTCCGATGAGTGAGGAGGGGAAGAACAGAGGAATTGTCACCGATAACCCTTATTATGGCACATTTCAAGGCGTCGCTAACTACTATCCTCCTCACAACCATTCTGCTTCCTCCGGTGCCCCTTCTTACGGTTATCATCAAGGACAAGGATACCACGTTGTTCCAGTTTATGCTGTTGGTGAAGGAAGGCCTGTAAGAGAGCGTCGTCTTCCTTGTTGTGGACTTGGTTTAGGTTGGCTCTTGTTTATAATTGGTTTCATTCTTGGTGGCATTCCCTGGTACATTGGAACCTTCATTCTAATGTGTGTACATATGGATTACCGAGAAAAGCCTGGATTAATTGCGTGCGCAGTTGCTTACCACCAATACCAAGTTGTTGGGAGGGCTCTCCCTACGGAAGCAGATGAACACCCGAAGATTTATCGCATGAAGCTATGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGGTATTTTCTGAGGAAGCTGAAGAAGGTTAAGAAGAGTAATGGTCAAGTCCTTGCTATCAATGAGATTTTTGAGAAGAACCCAACCAAGATTAAGAATTATGGCATCTGGTTGAGGTATCAGAGTAGGACAGGCTATCACAACATGTACAAGGAGTACCGTGATACCACACTAAATGGTGCAGTTGAGCAGATGTACAATGAGATGGCTTCTCGTCACAGGGTCCGGTACCCTTGCATCCAAATTATCAAGACTGCCACCGTCCCAGCCAAGCTTTGCAAAAGGGAAAGCACCAAACAATTCCACAACTCGAAAATCAAGTTTCCATTGGTGTTCAAGAAAGTTAGGCCACCTTCAAGGAAGTTGAAGACCACATATAAGGCGAAAAAGCCCAACTTGTTTATGTAA
894
0.4519
MISEVSPMSEEGKNRGIVTDNPYYGTFQGVANYYPPHNHSASSGAPSYGYHQGQGYHVVPVYAVGEGRPVRERRLPCCGLGLGWLLFIIGFILGGIPWYIGTFILMCVHMDYREKPGLIACAVAYHQYQVVGRALPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRYPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKAKKPNLFM*
298
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Apr1g1655
297
PANTHER
60S RIBOSOMAL PROTEIN L18A
257
297
IPR028877
-
Apr1g1655
297
PANTHER
60S RIBOSOMAL PROTEIN L18A
124
256
IPR028877
-
Apr1g1655
297
Hamap
50S ribosomal protein L18Ae [rpl18a].
125
188
IPR028877
-
Apr1g1655
297
Gene3D
-
119
190
-
-
Apr1g1655
297
PANTHER
60S RIBOSOMAL PROTEIN L18A
124
256
-
-
Apr1g1655
297
PANTHER
60S RIBOSOMAL PROTEIN L18A
257
297
-
-
Apr1g1655
297
Pfam
Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
126
247
IPR023573
GO:0003735|GO:0005840|GO:0006412
Apr1g1655
297
Gene3D
-
191
266
-
-
Apr1g1655
297
SUPERFAMILY
RplX-like
190
265
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Apr1g1655
Apr-Chr1
26216404
26225765
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Apr1g1655
122
297
Cytoplasmic Ribosomal Protein Gene Family
AT2G34480
92.045
2.17e-119
340
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Apr1g1655
K02882
-
rcu:8264126
473.781
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Apr1g1655
1
26216404
26225765
Apr1g1655
1
26216404
26225765
ECH
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