Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1655 ATGATTTCCGAGGTTTCTCCGATGAGTGAGGAGGGGAAGAACAGAGGAATTGTCACCGATAACCCTTATTATGGCACATTTCAAGGCGTCGCTAACTACTATCCTCCTCACAACCATTCTGCTTCCTCCGGTGCCCCTTCTTACGGTTATCATCAAGGACAAGGATACCACGTTGTTCCAGTTTATGCTGTTGGTGAAGGAAGGCCTGTAAGAGAGCGTCGTCTTCCTTGTTGTGGACTTGGTTTAGGTTGGCTCTTGTTTATAATTGGTTTCATTCTTGGTGGCATTCCCTGGTACATTGGAACCTTCATTCTAATGTGTGTACATATGGATTACCGAGAAAAGCCTGGATTAATTGCGTGCGCAGTTGCTTACCACCAATACCAAGTTGTTGGGAGGGCTCTCCCTACGGAAGCAGATGAACACCCGAAGATTTATCGCATGAAGCTATGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGGTATTTTCTGAGGAAGCTGAAGAAGGTTAAGAAGAGTAATGGTCAAGTCCTTGCTATCAATGAGATTTTTGAGAAGAACCCAACCAAGATTAAGAATTATGGCATCTGGTTGAGGTATCAGAGTAGGACAGGCTATCACAACATGTACAAGGAGTACCGTGATACCACACTAAATGGTGCAGTTGAGCAGATGTACAATGAGATGGCTTCTCGTCACAGGGTCCGGTACCCTTGCATCCAAATTATCAAGACTGCCACCGTCCCAGCCAAGCTTTGCAAAAGGGAAAGCACCAAACAATTCCACAACTCGAAAATCAAGTTTCCATTGGTGTTCAAGAAAGTTAGGCCACCTTCAAGGAAGTTGAAGACCACATATAAGGCGAAAAAGCCCAACTTGTTTATGTAA 894 0.4519 MISEVSPMSEEGKNRGIVTDNPYYGTFQGVANYYPPHNHSASSGAPSYGYHQGQGYHVVPVYAVGEGRPVRERRLPCCGLGLGWLLFIIGFILGGIPWYIGTFILMCVHMDYREKPGLIACAVAYHQYQVVGRALPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRYPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKAKKPNLFM* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1655 297 PANTHER 60S RIBOSOMAL PROTEIN L18A 257 297 IPR028877 -
Apr1g1655 297 PANTHER 60S RIBOSOMAL PROTEIN L18A 124 256 IPR028877 -
Apr1g1655 297 Hamap 50S ribosomal protein L18Ae [rpl18a]. 125 188 IPR028877 -
Apr1g1655 297 Gene3D - 119 190 - -
Apr1g1655 297 PANTHER 60S RIBOSOMAL PROTEIN L18A 124 256 - -
Apr1g1655 297 PANTHER 60S RIBOSOMAL PROTEIN L18A 257 297 - -
Apr1g1655 297 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 126 247 IPR023573 GO:0003735|GO:0005840|GO:0006412
Apr1g1655 297 Gene3D - 191 266 - -
Apr1g1655 297 SUPERFAMILY RplX-like 190 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1655 Apr-Chr1 26216404 26225765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1655 122 297 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 92.045 2.17e-119 340
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1655 1 26216404 26225765 Apr1g1655 1 26216404 26225765 ECH