Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1653 ATGGGTATGACCACTCTAACATCCTCTGTTGTCTCCTTCTCCTTCAAGGACTTAACACCCTACTTCCTATGCTTCCTACTCCTCCTCCTTCTCCTCGAACAGATCTCCTACCTCCTCAAGAAGGGCTCAGTCCCAGGACCAGCCCTAGTGCCACCCTTCCTAGGCAACGCAATCCCATTGGTACGAAACCCAACAAAGTTCTGGGACCTGCAATCCTACCTAGCCAAGTCCACCACCCTAGGATTCTCCGTCAACTACATCATCGGCAACTTCATCGTCTTCATCCGAGACACCGAACTCTCTCACAAAGTCTTCGCCAATGTCAGGCCCGACGCCTTCCGCCTCGTCGGCCACCCCTTCGGCAAAAAACTCTTCGGGGAACACAACCTCATCTACATGATGGGCCAAGACCACAAAAACCTCCGCCGTAGGATAGCCCCCAACTTCACCCCCAAGGCCCTCTCCACCTACACAAGCCTCCAGCAAATTATAATCCTCAACCATCTCAAGTCATGGGTCCAGAAAGCCCAAGCCCAACAACACTCAATTCCCCTCCGTATCCTCGCCCGCGACATGAACCTCGACACTTCCCAGACTGTCTTCGTCGGCTCCTACTTGGGCCCAAAAGCCCGAGAGCGCTTCGAGCGTGATTACTTCCTCTTCAACGTCGGCCTCATGAAGCTCCCCATTGATTTCCCCGGCACCGCGTTTCGAAACGCGAGGCTCGCCGTCGACCGCCTCGTCGGAGCCCTGGCCACCTGCGCCGAGATGAGCAAGGCGAGGATGGAGAAGGGAGAAGAACCTTCGTGCCTCATCGATTACTGGATGCAGGACACTCTGAGGGAAATCGAAGAGGCAAGGCTCGCCGGAGAGCACGTTATGCCGTTCACCTCGGACGCCGAGATCGGCGGCTACCTCTTCGACTTCCTCTTCGCGGCGCAGGACGCGTCCACGTCGTCGCTGCTGTGGGCGGTGGCGCTTCTGGACTCGCACCCGGAGGTGCTGGCGAAGGTGAGGGAGGAGGTTGCCGGAATCTGGTCGCCGGAGTCGGACGTGCTGATAACTTCGGAGCAGCTGAGGGAGATGAAGTACACGCAGGCGGTGGCGCGTGAGGTGGTGAGGTTTCGGCCGCCGGCGACGCTGGTACCGCACATCGCGGCGGAGAGGTTTCCGCTGACGGAATCTTATACGATACCGAAGGGAGCAATTATTTTTCCGTCGGCGTTCGAGTCGTCGTTTCAGGGGTTCACTGAACCGGACCGGTTTGATCCGAACCGGTTTTCGGAGGAGAGGCAAGAGGACCAAATATTTAAAAGAAACTTTTTGGCGTTTGGGGCTGGGCCCCACCAGTGTGTGGGCCAGAGGTACGCGTTAAATCATCTTGTTTTGTTTATCGCCATGTTCTCAACGTTGATTGATTTCAAGAGGGACAGAACTGACGGCTGTGATGAGATCGCCTATGTCCCCACTATTTGCCCCAAAGACGATTGCAGGGTTTTCCTCTCTAACCGTTGCGCACGGTATCCTTCCTTCCCTGTGGTGGATGAGCTTGTCAAATGA 1560 0.5615 MGMTTLTSSVVSFSFKDLTPYFLCFLLLLLLLEQISYLLKKGSVPGPALVPPFLGNAIPLVRNPTKFWDLQSYLAKSTTLGFSVNYIIGNFIVFIRDTELSHKVFANVRPDAFRLVGHPFGKKLFGEHNLIYMMGQDHKNLRRRIAPNFTPKALSTYTSLQQIIILNHLKSWVQKAQAQQHSIPLRILARDMNLDTSQTVFVGSYLGPKARERFERDYFLFNVGLMKLPIDFPGTAFRNARLAVDRLVGALATCAEMSKARMEKGEEPSCLIDYWMQDTLREIEEARLAGEHVMPFTSDAEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLAKVREEVAGIWSPESDVLITSEQLREMKYTQAVAREVVRFRPPATLVPHIAAERFPLTESYTIPKGAIIFPSAFESSFQGFTEPDRFDPNRFSEERQEDQIFKRNFLAFGAGPHQCVGQRYALNHLVLFIAMFSTLIDFKRDRTDGCDEIAYVPTICPKDDCRVFLSNRCARYPSFPVVDELVK* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1653 519 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 Gene3D Cytochrome P450 38 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 PANTHER BNAA05G09340D PROTEIN 14 503 - -
Apr1g1653 519 PANTHER CYTOCHROME P450 26 14 503 - -
Apr1g1653 519 Pfam Cytochrome P450 46 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1653 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1653 Apr-Chr1 26198834 26200393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1653 15 511 Cytochrome P450 AT2G34500 67.404 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1653 K09832 - gmx:100808148 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1653 1 26198834 26200393 Apr1g1653 1 26198834 26200393 ECH