Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1643 ATGGGAAGACTAATAACAACTTCCAAACCTATCATCCTCCAATCAAAGCTCCTCTGTTTTTCTCTTCTCTATCTCTTCACCACTCTGTTCCTTGCTCTTTACACCACTTTGTCTCAGTCCAAGTGCTTTTTCCGATCATCCCCTTTGGATCCCATCCACAATTCTCTCTTCTCTTACCCTTCTTCCTATGGAGAGCACAAATATGCTGTCTCAACCACCCGTTCTACATGCTCTTCCCCTGTTTTCTTTTCTGATTACTGGAATGTTGTAAAGGAGATCAACAATTACCGGAAGAAAAAATCTCAAGCTTATTCAGGGGTTCTGAGGTACATGCAGGGGAATGCAGATAGTTTCGGTGGGAATCTCAGCACCCTTAAGAGGTTTTCATATTTTGATCATCAAAATGATAGCACAGAAGTTCCATGCGGATTTCTGAAGAAGTTTCCAATCAGTGATTCTGATCGAATTGCAATGGAAAAGTGTGATAGTGTAGTAGTGGTTTCAGCAATCTTCAATGATCATGACAAAATCCGACAACCGAAGGGTCTTGGGTCAAAAACGTTGGAAGATGTGTGTTTCTTCATGTTTGTAGATGATGTTACCCTCAAAGGTCTTGAACACCATGGAATGATTTCAACAAAATCTAGAGAATACAAGATAGGTGTATGGAGGGTTGTGAAGGTTTCAAGAGAGGATTTGTATCAAAACCCGGCAATGAATGGGGTTATACCAAAATATTTAGTCCATAGGTTATTCCCAAATTCTAAATTTAGCATTTGGATAGATGCAAAGTTGCAACTAATGGTTGATCCGTTGTTGTTGATTCATTCACTTGTTATATCTGAGAATGTAGACATGGCTATATCAAGACACCCTTATTATGTTCATACCATGGAAGAAGCAATGGCAACTGCAAGGTGGAAGAAATGGTGGGATGTTAATGCCTTAAAGGTGCAAATGGAAACATACTGTGAAAATGGATTGCAACCATGGAGTCCCAACAAGCAGCCCTATGCTTCAGATGTACCAGACAGTGCTTTGATCTTGAGGAGGCATGGAGTGAGCAGTAACCTCTTCTCCTGCCTCATATTTAATGAGTTGGAGGCATTTAACCCAAGAGACCAATTACCCTTTGCATTTGTTAGAGATCACATGAAGCCCAACCTGAAACTGAACATGTTTGAGGTGGAAGTATTTGAACAGGTGGCACTGGAGTACAGACACAATCTCAAGAATAGTGATGGGACCACTGTCAAGAAAGTGTCCACTTCAAGAAGAACCAAAAGGGTAGACCCAGATTTGTTATATGTGAACGGCAGCTGTTGCAGCAAGTGCCAGAAGTATCTTTCCATTATGTGGGGTGAATCCAATGATTAA 1377 0.4089 MGRLITTSKPIILQSKLLCFSLLYLFTTLFLALYTTLSQSKCFFRSSPLDPIHNSLFSYPSSYGEHKYAVSTTRSTCSSPVFFSDYWNVVKEINNYRKKKSQAYSGVLRYMQGNADSFGGNLSTLKRFSYFDHQNDSTEVPCGFLKKFPISDSDRIAMEKCDSVVVVSAIFNDHDKIRQPKGLGSKTLEDVCFFMFVDDVTLKGLEHHGMISTKSREYKIGVWRVVKVSREDLYQNPAMNGVIPKYLVHRLFPNSKFSIWIDAKLQLMVDPLLLIHSLVISENVDMAISRHPYYVHTMEEAMATARWKKWWDVNALKVQMETYCENGLQPWSPNKQPYASDVPDSALILRRHGVSSNLFSCLIFNELEAFNPRDQLPFAFVRDHMKPNLKLNMFEVEVFEQVALEYRHNLKNSDGTTVKKVSTSRRTKRVDPDLLYVNGSCCSKCQKYLSIMWGESND* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1643 458 Pfam Protein of unknown function (DUF616) 113 408 IPR006852 -
Apr1g1643 458 PANTHER ALKALINE CERAMIDASE-RELATED 3 455 IPR006852 -
Apr1g1643 458 PANTHER OS01G0210400 PROTEIN 3 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1643 Apr-Chr1 26112555 26116046 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1643 - - gmx:100809755 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1643 1 26112555 26116046 Apr1g1643 1 26112555 26116046 ECH
Apr1g1643 1 26112555 26116046 Apr3g2251 3 38221160 38233434 PCT