Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1632 ATGAGGAGAAACTTCAACTTGGAACTTGCCCTTTTTCCTCTCTGCGATTCTGACCACCGCCACCAACACCACATGGTTGAAGAAGCCAGGGAGAGTCCAATGCAAAATTACCTCCATCACCACCACCAGCAGGAGCAGCAACAGCCGTTGACCATTTTCTATGATGGGAAGATTTGTGTTGCAGATGTTACGGAGCTTCAGGCCAAATCCATTTTAATGCTTGCTAATAAAAGAATGGAGGAAAGAGTGAAGACACCAACTGGGTCAGCGCCATCTTCACCAACCATAAGGCATTCTCATAATCAATTGAATAGCCCTGGCCTTTCTATGAGAAGATCGTTGCAACGGTTCCTCCAAAAAAGAAGGCATCGAACCCAAGAGGCGTCGCCATACAATCACTAG 402 0.4652 MRRNFNLELALFPLCDSDHRHQHHMVEEARESPMQNYLHHHHQQEQQQPLTIFYDGKICVADVTELQAKSILMLANKRMEERVKTPTGSAPSSPTIRHSHNQLNSPGLSMRRSLQRFLQKRRHRTQEASPYNH* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1632 133 Pfam tify domain 45 76 IPR010399 -
Apr1g1632 133 PANTHER - 1 133 - -
Apr1g1632 133 ProSiteProfiles Tify domain profile. 43 77 IPR010399 -
Apr1g1632 133 MobiDBLite consensus disorder prediction 86 110 - -
Apr1g1632 133 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 133 IPR040390 -
Apr1g1632 133 Pfam Jas motif 111 131 IPR018467 -
Apr1g1632 133 SMART tify_2 43 77 IPR010399 -
Apr1g1632 133 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1632 Apr-Chr1 25973849 25975730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1632 1 131 Tify Gene Family AT1G30135 41.791 1.81e-25 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Apr1g1632 tify 3.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1632 - - gmx:100500349 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1632 1 25973849 25975730 Apr1g1632 1 25973849 25975730 ECH