Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1604 ATGGAAACGCCCACAGAGAAAAGTGAGAGACCATTGAGAATGGCAAAGTTTAGTTTAAGGTGTGGTGCTTCGGATTTCGTCTACTATGGAGTTCTACTTTGTCATCTGTTATCACAGCTTTTCTTTCAACTTACATGGTGTGGCTCCACAGTACAGTTCCTTCCTGGATTCGAAGGACCCCTTCCTTTTGTTCTTGAAACGGGGTATGTGGGGGTGGGTGAAGGAGAGAATGTTCAAGCCTTCTACTACTTCATTGAATCAGAGAGCAACCCAAAGAAGGATCCTCTCATGCTTTGGCTCACTGGGGGTCCTGGTTGCTCTTCCCTCTCCGGCCTTGTCTTTCAAATAGGTCCATTTGCATTTAAAAAAGAGGAATACAATGGGAGCCTGCCTAATCTGGTCTTGAAGCCACATTCATGGACAAAGGTGAGTAGCATTATATTTGTAGACTTGCCGGTTTCCACGGGCTTCACTTATGCTAGAACAGAATTTGCTGCTCAACGAAGCGACTGGCTACATGTTCACCAAGTCCATCAATTTCTTAGGAAGTGGTTGATTGATCATCCAAGATTTTTGTCAAATGATTTTTACATTGGTGGCGATTCATATTCTGGCATTCCTATTCCTGTAATTGTTCAAGAAATTTCACAAGCAAATGAAAAAGGGGTCCAACCATGGATAAACGTCCAGGGATACCTGCTGGGGAATGCAGCAACAACTACATGGGAAGGAAACTATGCCATCCCCTTTGCTCATGGAATGGGACTTATTTCAGACGAGTTATACGATTCACTGCAAAATAATTGTAATGGAGAGTATATGAATGTAGACCCCAGAAATGTATTATGTTTAAGAGATCTCGCCTCATTCGATGAGGTTATATCAGGAATTAATAAAGCCCATATTTTGGAGCCGTTATGCGAGTTGGATGATGCTGAAACTACTCAGAGGAGATCTCTAATGAGGAAACATCTCTGGAATAATGTCCTCAAAACTCATGTCGAATTGCCACCCTTCAGTTGTCGGATTTATGTGTACTTCCTCTGTGCTTACTGGGCTAATGATGATAATGTTCGCAGAGCATTGCACATCCGAGAGGGAAGTATAGGAAAATGGCATCGCTGCAGCTACAATATACCTCAAAAGAGGGATATCCCCAGCAGCTTTGAGTATCATGTAAACCTTAGTAGAAAAGGTTATCGTTCTCTTATATACAGTGGTGATCATGACATGGCGTTTACTTTCTTGTCAACTCAAGCATGGATTACATCTTTAAACTATTCCATTGTGGATGAGTGGAGGCAATGGGGTACAAATGGCCAAGTGGCAGGATACACAAGGACTTACTCCAATCGGATGACATATGCAACTGTGAAGGGTGGAGGCCATACAGCTCCCGAGTACAGGCCTGAAGAATGCTTTGCCATGTTCAGTAGGTGGATATCTAATCAGTCTTTGTAG 1461 0.4285 METPTEKSERPLRMAKFSLRCGASDFVYYGVLLCHLLSQLFFQLTWCGSTVQFLPGFEGPLPFVLETGYVGVGEGENVQAFYYFIESESNPKKDPLMLWLTGGPGCSSLSGLVFQIGPFAFKKEEYNGSLPNLVLKPHSWTKVSSIIFVDLPVSTGFTYARTEFAAQRSDWLHVHQVHQFLRKWLIDHPRFLSNDFYIGGDSYSGIPIPVIVQEISQANEKGVQPWINVQGYLLGNAATTTWEGNYAIPFAHGMGLISDELYDSLQNNCNGEYMNVDPRNVLCLRDLASFDEVISGINKAHILEPLCELDDAETTQRRSLMRKHLWNNVLKTHVELPPFSCRIYVYFLCAYWANDDNVRRALHIREGSIGKWHRCSYNIPQKRDIPSSFEYHVNLSRKGYRSLIYSGDHDMAFTFLSTQAWITSLNYSIVDEWRQWGTNGQVAGYTRTYSNRMTYATVKGGGHTAPEYRPEECFAMFSRWISNQSL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1604 486 Gene3D alpha/beta hydrolase 48 318 IPR029058 -
Apr1g1604 486 Gene3D - 346 486 - -
Apr1g1604 486 SUPERFAMILY alpha/beta-Hydrolases 51 485 IPR029058 -
Apr1g1604 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Apr1g1604 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Apr1g1604 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 209 IPR001563 GO:0004185|GO:0006508
Apr1g1604 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 453 466 IPR001563 GO:0004185|GO:0006508
Apr1g1604 486 Pfam Serine carboxypeptidase 55 483 IPR001563 GO:0004185|GO:0006508
Apr1g1604 486 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 30 484 - -
Apr1g1604 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 484 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1604 Apr-Chr1 25629949 25634601 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1604 47 74 Calmodulin-binding Proteins AT2G22960 71.429 1.36e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1604 K16296 - gmx:100792006 789.26