Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1603 ATGGAAATGCTTAGAGAGAAAAGTGGGAAACCATTGAAAATGGCAAAGTTTAGTTTGAGTTGTGGTGCTTCGGATTTCGTCTACTTTGGAGTTCTACTTTCCCATCTTTTGTTATCACAATTTTTCTTTCAACTTACATGGTGTGGCTCCACAGTACAGTTCCTTCCTGGATTCGAGGGACCCCTTCCTTTTGTTCTCGAAACGGGGTATGTGGGGGTGGGTGAAAGAGAGGATGTTCAAGCCTTCTACTACTTCATTGAATCAGAGAGCAACCCAAAGAAGGATCCTCTAATGCTTTGGCTCACTGGGGGTCCTGGTTGCTCTGCCTTGTCTGGCCTTGTCTTTGAAATAGGTCCACTTGCATTTAAAAAAGAGGAATACAATGGGAGCCTGCCTAATATGGTCTTGAGGCCACACTCGTGGACAAAGGTGAGTAGTATTATATTTGTAGACTTGCCGGTTTCCACGGGCTTCACTTATGCTAGAACAGAGTTTGCTACTCAACGAAGCGACTGGCTCCTAGTTCATCAAGTCCATCAATTTCTTAGGAAGTGGTTGATTGATCATCCAAGATTTTTGTCAAATGAAGTTTACATCGGTGGCGATTCATATTCTGGCATTCCTATTCCTGTAATTGTTCAAGAAATTTCACAAGCAAATGAAAGAGGGGCCAAACCATGGATAAATCTCCAGGGATACCTGCTGGGGAATGCAGCAACAACTACATGGGAAAAAAACTATGCAATCCCTTATGCTCATGGAATGGGACTTATTTCTGATGAGTTATACGATTCACTGCAAAATAATTGTAACGGAGAGTATATAAATGTAGACCCCAGAAATGTATTATGTTCAAGAGATCTCGACTCATTCGATGAGGCTACATCAGGAATTAATAAAGCCCATATTTTGGACCCGGCATGTGAGTGGATTGAAACCCATCATGAAACTTCTCAAAGGAGATCTATAATGAAGAAACATCCTGGGAAGAAGGTCCTCAGTACTCATCTCAAATTGCCACCCTTAATCTGTCGGAGTTATGTGTACTTCCTCTCTGTCTATTGGGCTAATGATGATAATGTTCGCAGAGCATTGCACATCCGTAAGGGAAGTATAGGAAAATGGCATCGCTGTACCTTCAATATACCCAACAAGAGGGATATCCCTAGCAGCTTTGAGTATCATGTAATCCTTAGTAGAAAAGGCATTCGTTCACTTATATACAGTGGTGATCATGACATGACGATTCCTTTCTTGGCGACTCAAGCATGGATAAGATCTTTAAACTACTCCATTGTGGATGATTGGAGACAATGGCGTACAAATGGCCAAGTGGCAGGGTACACAAGGACTTACTCAAATCGGATGACATTTGCAACTGTGAAGGGTGGAGGCCATACAGCTCCCGAGTACAGGCCTGAAGAATGCTTTGCCATGTACAGTAGATGGATATCTAACAAGGCTTTGTAG 1470 0.4245 MEMLREKSGKPLKMAKFSLSCGASDFVYFGVLLSHLLLSQFFFQLTWCGSTVQFLPGFEGPLPFVLETGYVGVGEREDVQAFYYFIESESNPKKDPLMLWLTGGPGCSALSGLVFEIGPLAFKKEEYNGSLPNMVLRPHSWTKVSSIIFVDLPVSTGFTYARTEFATQRSDWLLVHQVHQFLRKWLIDHPRFLSNEVYIGGDSYSGIPIPVIVQEISQANERGAKPWINLQGYLLGNAATTTWEKNYAIPYAHGMGLISDELYDSLQNNCNGEYINVDPRNVLCSRDLDSFDEATSGINKAHILDPACEWIETHHETSQRRSIMKKHPGKKVLSTHLKLPPLICRSYVYFLSVYWANDDNVRRALHIRKGSIGKWHRCTFNIPNKRDIPSSFEYHVILSRKGIRSLIYSGDHDMTIPFLATQAWIRSLNYSIVDDWRQWRTNGQVAGYTRTYSNRMTFATVKGGGHTAPEYRPEECFAMYSRWISNKAL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1603 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Apr1g1603 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Apr1g1603 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Apr1g1603 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Apr1g1603 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 488 IPR001563 GO:0004185|GO:0006508
Apr1g1603 489 SUPERFAMILY alpha/beta-Hydrolases 52 487 IPR029058 -
Apr1g1603 489 Gene3D alpha/beta hydrolase 49 319 IPR029058 -
Apr1g1603 489 Gene3D - 349 488 - -
Apr1g1603 489 Pfam Serine carboxypeptidase 56 486 IPR001563 GO:0004185|GO:0006508
Apr1g1603 489 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 29 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1603 Apr-Chr1 25612228 25618555 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1603 48 75 Calmodulin-binding Proteins AT2G22960 71.429 1.46e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1603 K16296 - gmx:100792006 827.009