Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1584 ATGGAATCAAAACCTGCGAGGTTTACGCTGGGGAAGCAATCATCGCTGGCCCCAGAACGCCGCAACGAAGAAGCAGAGCTTCAAAGTGATGGAGACGCTGTTGATCCAGGAGTGAGGTTGATGTATTCAGCAAATGAAGGCGATCTTGATGGTATCCGTGAGGTGTTGGAATCGGGTGTGAGCGTGAATTTCAGGGATATTGATTATCGCACTGCTCTTCATGTTGCAGCGTGTCAGGGTTTCACTGATGTTGTTGATTTGTTGCTCCAAAATGGTGCTGAGGTTGACCCTAAAGATCGATGGGGGAGCACGCCACTTGCAGATGCTATTTTTTATAAAAACAATGATGTGATCAAGCTATTGGAGAAGCATGGAGCAAAGCCTCTGATGGCCCCAATGCATGTCAATCATGCACGTGAAGTCCCAGAATATGAAATCAATCCTAAAGAGCTTGATTTTACCAACAGTGTGGATATATCAAAGGGGACTTTCTGTAGTGCATTGTGGGGTGGGACAGAGGTTGCAGTAAAAAAGCTTGGGGAGGACGTACTTTCTGATGAGGAGAAAGTGAAGGCTTTCAGAGATGAGCTTGCTCTGTTCCAGAAGATCCGCCATCCAAATGTAGTTCAATTTCTGGGTGCTGTGACCCAGAGTAGTCCGATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTTCGTGATTTCTTGAAAAGAAAAGGAGCTTTGAAACCATCAACAGCAGTGAGATTTGCACTTGATATTGCTAGGGGAGTTGGTTATTTGCATGAAAATAAGCCATCACCCATTATTCACCGTGATCTTGAGCCTTCTAATATATTGCGGGATGATTCTGGATACCTAAAAGTTGCAGACTTTGGTGTTAGCAAGTTGCTGGCAGTTAAGGAAGACAAGCCTCTAACTTGCCAAGATACTTCCTGCCGCTATGTGGCTCCTGAAGTTTTCAAACAAGAAGAATATGATACCAAAGTGGATGTATTCTCATTTGCACTAATTCTGCAAGAGATGATCGAAGGCTGCCCACCTTTTTATGCAAAGCAAGAAGACGAGGTTCCTAAGGTATATGCTGCAAAAGAGCGGCCTCCTTTCCGAGCTCCAGCCAAGCGTTATTCCCATGGTATTCGAGAATTGATTGAAGAGTGCTGGAATGAGAATCCAGCAAAGAGGCCAACATTTAGACAAATAATAACAAGGCTGGAGTCTATCTACAACACAATTGGTCAAAAAAGACGTTGGAAGGTTAGGCCATTGAAATGCTTCCAGAATCTGGAAGCCTTGCTGAAGAGAGATCATTCAAATGCAAGCAGTCGCGGTGGTTCATCTCGCTCCACATCAAGCCGATAA 1365 0.4454 MESKPARFTLGKQSSLAPERRNEEAELQSDGDAVDPGVRLMYSANEGDLDGIREVLESGVSVNFRDIDYRTALHVAACQGFTDVVDLLLQNGAEVDPKDRWGSTPLADAIFYKNNDVIKLLEKHGAKPLMAPMHVNHAREVPEYEINPKELDFTNSVDISKGTFCSALWGGTEVAVKKLGEDVLSDEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRDFLKRKGALKPSTAVRFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGYLKVADFGVSKLLAVKEDKPLTCQDTSCRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFYAKQEDEVPKVYAAKERPPFRAPAKRYSHGIRELIEECWNENPAKRPTFRQIITRLESIYNTIGQKRRWKVRPLKCFQNLEALLKRDHSNASSRGGSSRSTSSR* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1584 454 SUPERFAMILY Ankyrin repeat 39 130 IPR036770 -
Apr1g1584 454 PIRSF ILK 1 429 - -
Apr1g1584 454 Gene3D - 7 144 IPR036770 -
Apr1g1584 454 ProSiteProfiles Ankyrin repeat region circular profile. 68 100 - -
Apr1g1584 454 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 437 - -
Apr1g1584 454 CDD STKc_MAP3K-like 159 406 - -
Apr1g1584 454 Pfam Ankyrin repeats (3 copies) 40 128 IPR002110 GO:0005515
Apr1g1584 454 ProSiteProfiles Ankyrin repeat profile. 68 100 IPR002110 GO:0005515
Apr1g1584 454 ProSiteProfiles Protein kinase domain profile. 153 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1584 454 Pfam Protein tyrosine and serine/threonine kinase 171 406 IPR001245 GO:0004672|GO:0006468
Apr1g1584 454 Gene3D Phosphorylase Kinase; domain 1 145 228 - -
Apr1g1584 454 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 437 - -
Apr1g1584 454 PRINTS Tyrosine kinase catalytic domain signature 225 238 IPR001245 GO:0004672|GO:0006468
Apr1g1584 454 PRINTS Tyrosine kinase catalytic domain signature 264 282 IPR001245 GO:0004672|GO:0006468
Apr1g1584 454 PRINTS Tyrosine kinase catalytic domain signature 331 353 IPR001245 GO:0004672|GO:0006468
Apr1g1584 454 PRINTS Tyrosine kinase catalytic domain signature 377 399 IPR001245 GO:0004672|GO:0006468
Apr1g1584 454 Coils Coil 452 454 - -
Apr1g1584 454 SMART ANK_2a 35 64 IPR002110 GO:0005515
Apr1g1584 454 SMART ANK_2a 68 97 IPR002110 GO:0005515
Apr1g1584 454 SMART ANK_2a 101 130 IPR002110 GO:0005515
Apr1g1584 454 Gene3D Transferase(Phosphotransferase) domain 1 229 448 - -
Apr1g1584 454 MobiDBLite consensus disorder prediction 1 34 - -
Apr1g1584 454 SUPERFAMILY Protein kinase-like (PK-like) 160 407 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1584 Apr-Chr1 25387720 25395125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1584 7 427 MAP Kinase Kinase Kinase AT4G18950 69.953 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Apr1g1584 PK_Tyr_Ser-Thr 2.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1584 - - gmx:100790126 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1584 1 25387720 25395125 Apr1g1584 1 25387720 25395125 ECH