Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1565 ATGATAAAGTGGGGTAGAAGAAAAAACCCTTCTTCAGCTTCTTCTTCTTCTGGCTCTTCTTTCATTTCTCATGCATCTCCTTTTTCTTGGTTGTCCAAGTTCAAGCGCATGAGGATCAATTCTGAGCCAAACAGAGGAAAACTTATCAAACAGAAGGCAAAGCAGAATTCATCTGTAGGTTCACCACAGTATTCTTGTGATTATGGAGAAAGGTTTTGTGTAGGGGATGATGCTGGTGCTTTCTGTAGACAATCATTTAATGAAGAGAGTTATGAGGATAAGAAAAATAGAGATATTGAAAAGAGTGTGATTCCATCCTATGGTGGTAGAAGGAATGATAAGAAACATGGAAGAAGAGAAGGGACCCTCAAGTTGAGGGAGAATGATATTATTCTAGGAGAAGAAAGGAAGTTGATGAATGATAGGAAGGTTTCAGTGGATATGGATGAGTACAGTCGGGAAAAGGAATATGAAAACTTAAGGAGGAGATTTGAGAGGAAAGCACAAAAAGTTTTTGAAGAGCATCTCTTGTCATTGGAAAGAGAAGTAGAGGAAGTTGAATTTGGATCCAATAAAGCAGTAGAAAAAGATGTGCTGCAATTTGAATCACCAAGCACTATTTGCACACCAAGAACACATTCTTTTGCCTCTTCTGCAGCTTTGAGGTATTCTATCCTTAGAAATAATATTATAGAAAAAATTGAGAAAAGTGACAGGTTATCTCAGAAGAAAATTGGTTCTAAGAGGCACAACATGAAACAAATTGAGGAGTTGAAGGTAAAGACTAACAGACAAAGGCAAACACTTCATGTCAGCGGAGAACTTCAGAGGAGGAAACCAAAGCAAAGCTCCAAGGTGAGGATATATTCTCCAAGGATGGTTTCCAAAGTTGAAATATGCAAAATAAAGGCTCTAGAAGATATGAGGAAAGCAAAATTAAAGATGAAGAAAGGAAGGGATGAAATTGTGGAGGATAAACCAGGATTAGATAACTTTGCTGTTGTTAAATGTTCATTAGATCCAAAGCAAGATTTCAGAGATTCAATGATTGAGATGATCACAGAAAATCAGATTAGCAGGCCAGAAGAAATGGAGGAACTGTTGGCATGTTATCTGACTTTGAATGCTGATGAGTATCATGATCTCATCATCAAAGTATTCAGGCAGGTGTGGTTTGACATGAGCCATGGTAGTTTGGATATTAAATCAGACATTCAATGTTGTTCCTATGAATAA 1236 0.373 MIKWGRRKNPSSASSSSGSSFISHASPFSWLSKFKRMRINSEPNRGKLIKQKAKQNSSVGSPQYSCDYGERFCVGDDAGAFCRQSFNEESYEDKKNRDIEKSVIPSYGGRRNDKKHGRREGTLKLRENDIILGEERKLMNDRKVSVDMDEYSREKEYENLRRRFERKAQKVFEEHLLSLEREVEEVEFGSNKAVEKDVLQFESPSTICTPRTHSFASSAALRYSILRNNIIEKIEKSDRLSQKKIGSKRHNMKQIEELKVKTNRQRQTLHVSGELQRRKPKQSSKVRIYSPRMVSKVEICKIKALEDMRKAKLKMKKGRDEIVEDKPGLDNFAVVKCSLDPKQDFRDSMIEMITENQISRPEEMEELLACYLTLNADEYHDLIIKVFRQVWFDMSHGSLDIKSDIQCCSYE* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1565 411 Pfam Transcriptional repressor, ovate 338 394 IPR006458 -
Apr1g1565 411 ProSiteProfiles OVATE domain profile. 334 393 IPR006458 -
Apr1g1565 411 Coils Coil 154 174 - -
Apr1g1565 411 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 404 IPR038933 GO:0045892
Apr1g1565 411 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 333 394 IPR006458 -
Apr1g1565 411 MobiDBLite consensus disorder prediction 1 22 - -
Apr1g1565 411 PANTHER TRANSCRIPTION REPRESSOR OFP4 11 404 - -
Apr1g1565 411 MobiDBLite consensus disorder prediction 8 22 - -
Apr1g1565 411 MobiDBLite consensus disorder prediction 93 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1565 Apr-Chr1 25193980 25195215 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Apr1g1565 Ovate 7.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1565 - - gmx:102666239 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1565 1 25193980 25195215 Apr1g1565 1 25193980 25195215 ECH
Apr3g2234 3 38077327 38086390 Apr1g1565 1 25193980 25195215 PCT