Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1552 ATGAAGACTTGTGATGAATGGAAACCTTTTATAGCAATGATAGCAATTGATTTTTCTTTTGCGGCAGTGAATATTCTTCTCAAGCAAGTCCTTGAAGAAGGAATGAACCATTTGGTTTTTATCACATACCGGTTGTCAATTGCTACCATTTTCGTAGCCCCAATCGGCTACTTTTGGGAAAGAAATGGGAGACCCCGGCTCACATTTCGAATTTTATGTTACCTCTTCCTCAGTGCCATTGTTGGGGCATCAGTCACTCAATACTTTTTCCTTCTCGGAATCCAATATACTTCTGCTACCTTTGCTTGTGCTTTCATCAACATGGTGCCTGTGGTCACATTCATGATAGCATTACCATTTGGGTTGGAAAGTGTTAATATCAAATGTAACAGTGGGAGAGCAAAGATTCTTGGTTCTCTGGTGTGCATAGGCGGTGCATTGTTGCTGACACTTTACAAAGGAACGCCACTGTTTAATTTTTCTCAGCATGAATCTGCAGTGAAGCTGGCTTCTACAGGGACAAAAGAGAGATGGACTACTGGTGTAATAGCATTGGTTTTGGGAACCCTCTTTTGGTCTTCTTGGTTTATTTTACAATCGAAAATAAGCAAGAGATATCCATGCCAGTATTCTAGCACAGGCATCATGACCTTCTTTGGAGCCATTCAATCAGCTGTTATTTGCTTGTTCACTAACCGTAATTTGTCCATATGGGTTATCAAGGGGAAGTTACAAATAATTGCTATTCTGTATGCTGGGATAATCGGATCAGGTTTCTGTTTTGTGGGCATGTCATGGTGTGTCAAGAAGAGGGGTCCTGTTTTTACTGCAGCATTCAGCCCTCTTGTTCAAATCATGGCAGCCATGATTGATATCCCTGTCTTGCATGAGCAGCTCCATCTTGGAAGTGTGATGGGATCAATCTTGGTGATTATGGGATTATACATTCTTCTGTGGGGTAAGAGCAAGGAGATGCATGACAGTGTGATCAAGTTAGTCCAAGAAGCAGAAGAAACCAAGGAACAAGAGCCGCAGCCGCAAATACTGTTGAGAGTGTCTTGTGATTCGCGCTTTCACTGA 1080 0.4204 MKTCDEWKPFIAMIAIDFSFAAVNILLKQVLEEGMNHLVFITYRLSIATIFVAPIGYFWERNGRPRLTFRILCYLFLSAIVGASVTQYFFLLGIQYTSATFACAFINMVPVVTFMIALPFGLESVNIKCNSGRAKILGSLVCIGGALLLTLYKGTPLFNFSQHESAVKLASTGTKERWTTGVIALVLGTLFWSSWFILQSKISKRYPCQYSSTGIMTFFGAIQSAVICLFTNRNLSIWVIKGKLQIIAILYAGIIGSGFCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPVLHEQLHLGSVMGSILVIMGLYILLWGKSKEMHDSVIKLVQEAEETKEQEPQPQILLRVSCDSRFH* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1552 359 PANTHER WAT1-RELATED PROTEIN 9 341 - -
Apr1g1552 359 PANTHER WAT1-RELATED PROTEIN 9 341 IPR030184 GO:0016021|GO:0022857
Apr1g1552 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Apr1g1552 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 323 - -
Apr1g1552 359 Pfam EamA-like transporter family 180 318 IPR000620 GO:0016020|GO:0016021
Apr1g1552 359 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1552 Apr-Chr1 25032536 25034706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1552 7 252 Nodulin-like Gene Family AT3G30340 51.807 1.44e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1552 - - gmx:100803670 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2218 3 37951326 37953517 Apr1g1552 1 25032536 25034706 PCT