Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1536 ATGAAGAACCCTGTGGTTGAGAGATTCTCCGAATTTTACGAGAAGTGGATTTGGAAGCTGGAAGAGATTCTTCACCAGCTTCTAGAGGTGTCCAAGCAGAGAAACCATGTGGTGAAGACTGAGCAAGAGTTGCAAGCACTGGTCTCCAAAGTCACCTCCCATTTGAAGGAATACTACACTGTGAAATGGGCTGCCGCACATGAAGACGTTCTTGTCTTCTTCTCTCCCGTTTGGTTGAGCCCTTTGGAGAATGCTTACCTCTGGATCACAGGGTGGAAGCCCTCCATTGTGTTCAGGCTTCTTGAGACTCTCAAGAAGCCAAGAGAGGAGTGCAACGTATTTGACATGAATGAGGAGCAGCAAAGGAAGACGGAGGAGCTCAGAATGAGGATAAGGATGGAGGAGGAGAAGGTGGAGAGGGAGATGGAGAGACAGCAAGTGGCCATGGCTGATCGCAAGATTGTGGAGTTGGCTAAGCTTTATAGCCGAGTAAGGAATGGTGGTGCTGATGTTGTGGCGGCAAATGTTGATGGGGTTGTAGAAGTGGCCATGAAGGGTGTTCTTGCAGGTTTGGAGAGGGTCATGAAGGCTTCTGATTGTGTCAGACTCAAGACACTCAAAGGGGTGTTGGATCTGCTTACCCCAATGCAGTGCGTGGAGTTCCTTGCTGCAAATATAGCTATGCAGCTACGCCTCAGGCAGTGGGGGAAGAAGAGGGACCTCGCTGGGTCCACACTCAATGTGAATGACTACAAGTGA 759 0.4967 MKNPVVERFSEFYEKWIWKLEEILHQLLEVSKQRNHVVKTEQELQALVSKVTSHLKEYYTVKWAAAHEDVLVFFSPVWLSPLENAYLWITGWKPSIVFRLLETLKKPREECNVFDMNEEQQRKTEELRMRIRMEEEKVEREMERQQVAMADRKIVELAKLYSRVRNGGADVVAANVDGVVEVAMKGVLAGLERVMKASDCVRLKTLKGVLDLLTPMQCVEFLAANIAMQLRLRQWGKKRDLAGSTLNVNDYK* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1536 252 Coils Coil 116 153 - -
Apr1g1536 252 PANTHER PROTEIN DOG1-LIKE 4 1 240 - -
Apr1g1536 252 ProSiteProfiles DOG1 domain profile. 6 242 IPR025422 GO:0006351|GO:0043565
Apr1g1536 252 Pfam Seed dormancy control 27 102 IPR025422 GO:0006351|GO:0043565
Apr1g1536 252 PANTHER - 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1536 Apr-Chr1 24843633 24844391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1536 40 233 bZIP Transcription Factor Family AT5G06960 28.866 1.02e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1536 - - gmx:100808459 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1536 1 24843633 24844391 Apr1g1536 1 24843633 24844391 ECH