Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1535 ATGGGATTGAGATGGGACGCATTTGGATTCTGGCTTAGAAGTTTTATTTGCTTGATCTTTGTTTGGGAAATCCAAGTGTGCTGGTCCCTTAATGATGAAGGATTGGCTTTGTTGGAGTTCCGGGCAAGAATAACTTCCGATCCCTATCATGCTTTGGAAAATTGGACTCCAAATGATTGTGACCCTTGCAAATGGTTGGGTGTTCATTGTGTAGATGGGAAAGTGCAAATGCTTGAGCTAAACGGGCTATCTCTGGAAGGGACAATTGCTCCTGATCTTGGGAAACTTAATCACCTAAAATCTGTTGTGTTATGCAAGAATAACTTTTCTGGTGCCATTCCCAAAGAACTTGGAGATCTCACCAAGCTAGAATTATTGGACTTAAGAGAGAATAAATTGTCAGGAAATATCCCAGAAGAAATTGGCAAGATGATACAGCTAAAACACTTTGTGTGGCAAGGCAAATTCAAGCAAAGGATCAAATCAGATTCATTGACAATTTCAATCAAAGAAGCACTTATGAAATACCTCAATGCCTTTGAGCTGCCACTATTCAAGCTAGAAAAGCCTGCCCTTAGTGGGCATGAAGAGAATCACTACGACCTTCTGCCCAGTTCCAATGAGCCAAAGATTGCCAAGAATGCGCAAAATCTTGTCAATTCTTCACGTCGTAGGTTACTTGAACAGTCCAGTAACCTTGCAGCTGCACCTTTTACTGGTGGACCAACTATAGAGTTCAGCACTGTTCCAACTACCCTGAGTAGTGGAGCCTTACCAGCTGTGCCAGATGCCAATAAGAAACAGAATCAGCCACCTGCACCCGATCATTCACCTCCTGAATCTCCTCATGATGCTTCTGATGCAAAACAAACAAGTCAACACCCTTCATCTAATGGTGCTTCTGGAAGGTTGTGGAAGTATATAATTATTATTGTTGTTGTAGTTGTGGTGGTCATTGTTATCATAATTCTTCTTTGCATTTGGCGAAAACGAGCTGCAAAAGTAATTACCCCTTGGAAGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTATAACAGGTGTCCCCAAGTTGAATCGAGCCGAACTAGAGACAGCCTGTGAGGATTTCAGCAATATCATTATTACTTTTGAAGGATGCATCATCTACAAAGGAACACTGTCCAGTGGAGTCGAGATTGCTGTTGTTTCTACCGTCATTACTTCTTCCCAAGATTGGTCAAAGAGCATGGAAATGAAATATCGGAGAAAGATTGATACTTTGTCCCGCATAAACCATAAAAACTTTATTAATCTTATTGGTTACTGTGAGGAAGAAGAACCATTCACAAGGATGTTGGTATTTGAGTATGCTCCAAATGGAAACCTATTTGAGCATCTGCATGTAGAGGAAATGGAACGTCTTGATTGGAGTGAAAGGATAAGAATTATCATGGGCACTGCTTACTGTCTTCAATACATGCACCATGATCTGAATCCACCAATAGCTCATGGGGACCTTAATTCGAATATGATCTTTCTAACAGATGACTTTGCAGCTAAGCTTGCAGAGGTTACTTTTAGAAGTATTGTAACACCAGCTAAGACAAGTGGAGGTGATTCAAAGAAAATTGAGTTATCAACTCAGGAAAATATTGAAAGCAATGTCTATAAATTTGGAATATTGTTGCTTGAAGTCATCTCAGGGAAATTGCCTTCCTCTGAAGAAGGCAACCTAGTGAACTGGGCTGCTGAGTACTTAAGTGACAAGAAAAGTATCAGCTGTATGATCGATCCCACCTTGGAGTCTTTCAAGGACAATGAACTTGATGTGATCTGTGAGGTGATCAAAGACTGTATTCAACCTGATCCAAAGTTAAGACCAACAATGAGGGACATAACTACAAAATTGAGGGAAGTGATTGGTGTGTCACCAGATCAAGCTGTCCCAAGACTTTCTCCACTATGGTGGGCTGAACTGGAAATATTGTCAGTGGAGGCAACTTAA 1986 0.4084 MGLRWDAFGFWLRSFICLIFVWEIQVCWSLNDEGLALLEFRARITSDPYHALENWTPNDCDPCKWLGVHCVDGKVQMLELNGLSLEGTIAPDLGKLNHLKSVVLCKNNFSGAIPKELGDLTKLELLDLRENKLSGNIPEEIGKMIQLKHFVWQGKFKQRIKSDSLTISIKEALMKYLNAFELPLFKLEKPALSGHEENHYDLLPSSNEPKIAKNAQNLVNSSRRRLLEQSSNLAAAPFTGGPTIEFSTVPTTLSSGALPAVPDANKKQNQPPAPDHSPPESPHDASDAKQTSQHPSSNGASGRLWKYIIIIVVVVVVVIVIIILLCIWRKRAAKVITPWKTGISGQLQKAFITGVPKLNRAELETACEDFSNIIITFEGCIIYKGTLSSGVEIAVVSTVITSSQDWSKSMEMKYRRKIDTLSRINHKNFINLIGYCEEEEPFTRMLVFEYAPNGNLFEHLHVEEMERLDWSERIRIIMGTAYCLQYMHHDLNPPIAHGDLNSNMIFLTDDFAAKLAEVTFRSIVTPAKTSGGDSKKIELSTQENIESNVYKFGILLLEVISGKLPSSEEGNLVNWAAEYLSDKKSISCMIDPTLESFKDNELDVICEVIKDCIQPDPKLRPTMRDITTKLREVIGVSPDQAVPRLSPLWWAELEILSVEAT* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1535 661 Gene3D Phosphorylase Kinase; domain 1 340 450 - -
Apr1g1535 661 PANTHER PROTEIN MALE DISCOVERER 2 1 661 - -
Apr1g1535 661 PANTHER LRR RECEPTOR-LIKE KINASE 1 661 - -
Apr1g1535 661 MobiDBLite consensus disorder prediction 284 299 - -
Apr1g1535 661 ProSiteProfiles Protein kinase domain profile. 333 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1535 661 SUPERFAMILY Protein kinase-like (PK-like) 381 629 IPR011009 -
Apr1g1535 661 Gene3D Ribonuclease Inhibitor 32 196 IPR032675 -
Apr1g1535 661 SUPERFAMILY L domain-like 29 152 - -
Apr1g1535 661 MobiDBLite consensus disorder prediction 257 299 - -
Apr1g1535 661 Pfam Protein tyrosine and serine/threonine kinase 382 630 IPR001245 GO:0004672|GO:0006468
Apr1g1535 661 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Apr1g1535 661 Gene3D Transferase(Phosphotransferase) domain 1 451 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1535 Apr-Chr1 24835793 24842131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1535 15 635 Receptor kinase-like Gene Family AT2G42290 26.686 4.36e-51 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Apr1g1535 PK_Tyr_Ser-Thr 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1535 - - lang:109337921 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1535 1 24835793 24842131 Apr1g1535 1 24835793 24842131 ECH
Apr1g1535 1 24835793 24842131 Apr3g2206 3 37848396 37853631 ECH