Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1496 ATGCATAAAATTAGAACTTCAGAACGCACTCTAATCTTTCCTTCTCACCCTCCCTTCCTCCATGATCATCCCCTCTCTCTCTCACACCTAGACACCGATCGTAATCTCCACCTCACTTTCCGCTACCTTCGCGCTTACGTTTCCAACGCCACAACCTCCCGCAACCCCTTCCACGTCATCTCTTCTTCCCTCTCCCAAGCCCTCCCTCACTTCTATCCCCTCGCCGCCACGCTTCGCCGCCGCCAAAATGACCGCCGCCTCGAAATCTGGTGCGCCGCCGGCCAAGGCGTTCCCCTTATTCACGCCGCCGCAGATTTCACCCTCGACTCGGTGAACTTCCTTGACGACCCGGCATCCATTTTCGTGGAGCAGTTGGTGCCCGACCCGGGACCCGAAGAGGGAATGGAGCACCCGTGCATGCTTCAGGTGACGGTGTTCAAGTGCGGCGGCTTCACTCTCGGCGCGGCCATGCACCACGCGCTCTGCGACGGCATGGGCGGGACTCTGTTCTTCAACGCGGTGGCTGAGTTGGCTCGCGGGTCGACCCGGATAACGGTTGACCCAGTTTGGGATCGCGAGAGGTTGCTGGGTCCCAGGTACCCGCCCCGAGTGGACTCGCCGTTGATAAGGGAGTTTCTGCGTTTGGAGAAGGGGTTTTCACCGTACGAACAAGACATTGGTGAGGTGGTGAGAGAGTGCTTCCATGTGAGGGATGAGCGCTTGGACGAGTTCAAGAGATCCTTGTTGGAACAATGTGGGTCCAATTTCACCACTTTTGAGGCTCTCGGTGCTTACATTTGGAGGTCCAAGGTGAGGGCCTCGGGATTGGAGGCTCATGAGAAGGTTAAATTTGCATACTCAATTAATATTCGGAGACTAATGAAGCCATCGCTACCTGCTGGCTATTGGGGTAATGGTTGTGTTCCAATGTATGTGCAGCTGAGTGTAAATGATTTGATAGAGAGACCCATTTGGGAAATAGCAGAGTTAATAAAAAAGAGTAAAAGTAATGTTACTGATGAGTATGTTCGGTCTTTCATCGATTATCAAGAGTTGCATTTTGGCGATGAAATCACGGCTGGGAAAGGGGTGAGTGGGTTCACTGATTGGAGGCACTTGGGCCATTCAACTGTGGACTTTGGGTGGGGAGGCCCAGTTACCGTTTTTCCGCTTGGAAGGAACTTGCTTGGGAGTGTTGAGCCTTGCTTCTTTTTGCCTTATTCAACGGCCAGTGCCGTGAAGAAGGAAGGGTTCAAGGTTTTGGTGACTTTGGCTCTGGCTGCGTTGCCTGCTTTCAGAGAAGACATGCGAGTGTTTTGCCAGGACCCGACCATGTAA 1338 0.5329 MHKIRTSERTLIFPSHPPFLHDHPLSLSHLDTDRNLHLTFRYLRAYVSNATTSRNPFHVISSSLSQALPHFYPLAATLRRRQNDRRLEIWCAAGQGVPLIHAAADFTLDSVNFLDDPASIFVEQLVPDPGPEEGMEHPCMLQVTVFKCGGFTLGAAMHHALCDGMGGTLFFNAVAELARGSTRITVDPVWDRERLLGPRYPPRVDSPLIREFLRLEKGFSPYEQDIGEVVRECFHVRDERLDEFKRSLLEQCGSNFTTFEALGAYIWRSKVRASGLEAHEKVKFAYSINIRRLMKPSLPAGYWGNGCVPMYVQLSVNDLIERPIWEIAELIKKSKSNVTDEYVRSFIDYQELHFGDEITAGKGVSGFTDWRHLGHSTVDFGWGGPVTVFPLGRNLLGSVEPCFFLPYSTASAVKKEGFKVLVTLALAALPAFREDMRVFCQDPTM* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1496 445 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 3 440 - -
Apr1g1496 445 Gene3D - 1 211 IPR023213 -
Apr1g1496 445 Pfam Transferase family 3 436 - -
Apr1g1496 445 Gene3D - 220 435 IPR023213 -
Apr1g1496 445 PANTHER ACYL TRANSFERASE 4 3 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1496 Apr-Chr1 24407910 24409616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1496 40 392 Monolignol Biosynthesis Gene Families AT5G48930 30.518 2.03e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1496 - - gmx:100817021 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1496 1 24407910 24409616 Apr1g1496 1 24407910 24409616 ECH