Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1492 ATGGGTTCAGGTGATTGGTTTAAGACAATTATTAGCTTAGGAAAATCAAAAGGAGGCAGATCAAAGAAAGCAAAGGGTATCTTAGCTCCCAAGAAAGTAAATGCGTCCAAATCAAACAATTGTACAAGAAAAGAGTCTAATGGTTTAGCAAATGGTACTAAAAGTGAAAGCCTTGTATCAGCTGGGGTATCAATTGAAACAGTTGCTGCAACAAGGATCCAGACTGCATTCCGAGCTTATAAGGCTAGAAAAGCTCTAGGTCGCTTGAAAGGGTTCACAAAACTGAAGATCCTAACAGATGGTTACTCTGTTAAAAAGCAAGCCAGTACAGCTATAACGTACCTTCATTCATGGAGCAAAATACAGTCTGAGATTAGAGCTCGCCGCATCTGTATGGTAACAGAAGACAGGATCAGGCGGAAGAAACTAGAGTCTCAACTAAAACTTGAGGCAAAGCTTCATGATCTGGAGGTTGAATGGTGTGGTGGTTCTGAAACTATGGAGGAAATCCTTGGAAGGATACATCAAAGGGAAGAAGCAGCAGTTAAGCGTGAAAGAGCCATGGCATATGCCTTTTCCCATCAGTGGAGGGCCAACTCCAGTCAGAGCCAATTGCTAGGTAATTATGAACTTAGCAAAGCTAATTGGGGTTGGAGCTGGAAGGAGCGTTGGATTGCTGCTCGGCCATGGGAAAGCCGTGTCTCCAGTTCCATTAAGAAAGCTCCACACAAGCAGTCAAGCAAGGTTCAGAAGGATAAGAGCACATCATCAACACCTAAAACCCCTCTTTCAGTTAAACCTACTTCAGCCAATGGTAAAGGAACTCCTCCTTTGGGCAATGCAAAAGGGGCTTTAAAAGCTAGGAGATTGTCTTATCCAACAACAGAAAAATCTGTGGTTCAAGAAGGAGTGCAATGA 918 0.4303 MGSGDWFKTIISLGKSKGGRSKKAKGILAPKKVNASKSNNCTRKESNGLANGTKSESLVSAGVSIETVAATRIQTAFRAYKARKALGRLKGFTKLKILTDGYSVKKQASTAITYLHSWSKIQSEIRARRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWCGGSETMEEILGRIHQREEAAVKRERAMAYAFSHQWRANSSQSQLLGNYELSKANWGWSWKERWIAARPWESRVSSSIKKAPHKQSSKVQKDKSTSSTPKTPLSVKPTSANGKGTPPLGNAKGALKARRLSYPTTEKSVVQEGVQ* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1492 305 MobiDBLite consensus disorder prediction 251 275 - -
Apr1g1492 305 PANTHER IQ-DOMAIN 5-RELATED 1 297 - -
Apr1g1492 305 PANTHER IQ-DOMAIN 9 1 297 - -
Apr1g1492 305 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Apr1g1492 305 Pfam IQ calmodulin-binding motif 68 85 IPR000048 GO:0005515
Apr1g1492 305 MobiDBLite consensus disorder prediction 235 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1492 Apr-Chr1 24385960 24400373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1492 1 293 IQD Protein Family AT2G33990 52.218 3.91e-88 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1492 - - gmx:100813685 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1492 1 24385960 24400373 Apr1g1492 1 24385960 24400373 ECH
Apr1g1492 1 24385960 24400373 Apr3g1732 3 33038755 33048747 ECH