Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1491 ATGGGGTCTGAAGATAAACATGGTGAGCAATCCCTTGGTATAGGCCTTAAGGTCATGCTAACAGCAGCTTTCTCTTTATTTGGTATGATATTATTCATCATCACCTTCTATTTTTGTCTAAAACATCACATTAGACGCCAACAAAGACGACGCCAAAACGACCTTGTTTATCAAATCAGCACTCAAATTGCACCAATTGATGTGAGTTCTGTGGAGTCACCCAACTCTGGCCTAAACCCTTTGATCATAGCCTCTTTGCCTAAACTCTTGTACAAGCAAACGGATCAGTTCAATGAAGGCGAAGTTATAGAGTGCTCGGTTTGCTTAGGAACTATTGTTGAAGATGCAATTACTAGGGTACTACCAAATTGTAAGCACATTTTTCATGTTGATTGTGTTGATAAATGGTTTAGTTCTAACACCACATGCCCAATTTGCCGCACTATGGTTGAACCAAAGGTGCAGGCAGCGCATGATCATTTAGCCATACGGGTCCATCAAGTCCAACCCACAGCACCATCGGTTGACGGTGGTGATGATGCCCAAGATGGTAATGAATTGGAGGTTGGGTGTTCGGGTTTGAGAATAGGATCTTTTCATAGGTTGGTTAGTAATAGGGAAAGGTCAGTGAGAAGGACTCATAGCTCTGATGAGTTTGCCGTAGAATATATGGAAAGGCACTAA 684 0.4211 MGSEDKHGEQSLGIGLKVMLTAAFSLFGMILFIITFYFCLKHHIRRQQRRRQNDLVYQISTQIAPIDVSSVESPNSGLNPLIIASLPKLLYKQTDQFNEGEVIECSVCLGTIVEDAITRVLPNCKHIFHVDCVDKWFSSNTTCPICRTMVEPKVQAAHDHLAIRVHQVQPTAPSVDGGDDAQDGNELEVGCSGLRIGSFHRLVSNRERSVRRTHSSDEFAVEYMERH* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1491 227 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 1 226 - -
Apr1g1491 227 SMART ring_2 105 146 IPR001841 -
Apr1g1491 227 PANTHER RING FINGER DOMAIN-CONTAINING 1 226 - -
Apr1g1491 227 Pfam Ring finger domain 104 147 IPR001841 -
Apr1g1491 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 153 IPR013083 -
Apr1g1491 227 SUPERFAMILY RING/U-box 82 154 - -
Apr1g1491 227 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1491 Apr-Chr1 24380339 24381022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1491 14 227 C3H Transcription Factor Family AT2G42360 33.921 1.29e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1491 K19038 - gmx:100786701 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1491 1 24380339 24381022 Apr1g1491 1 24380339 24381022 ECH