Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1483 ATGGGTATTCATCATGCAACTTCTGATGGGATTCTTGAGAATGTATGGGCTAAAATTATCAGTAGTGATAGAGCAAAGTCTTCTAATTCTTGGGAGGAACTTCCTAATCTTGATGGACGAGATGGGTCCACCGATATTCTACAAAGACTTCCAAGTTTAGGGAGGTGGATATCAATGGGAGCTGATTTTTGGGAAGAAGTTTTAGAAGGTATTGTACCTTACACAAGCAATACAGAAGATTCTAGCAATAACAACTTGGAACTTGGAAGTGCTAGTAAATCCAATAATAAGGTAGAAAGTGGTGTGAGAAGAGAGAAAGCAGATGCAAAACACTATCGGGGTGTAAGGAGAAGGCCATGGGGTAAATATGCAGCAGAGATAAGAGACTCATCCAAGAAAGGTGCTAGACTTTGGCTTGGTACATTTGATACAGCTGAAGAAGCAGCTTTAGCTTATGACAAAGCTGCTTTGAGAATTAGAGGTCCAAAGGCATACCTCAATTTCCCACTTGAGAGGGTCACAAACACTTTTGTATGTGACAACAAAGGAACTGATCTTGCTGCATGTGCTTCTACAACTTGTGACATGTATTGCCATGCTTGCTCACGCATTGAGAAAGAAGAAAGTTTCTTCAACTCCCGCAAGAGAAGATCACGTGATGTGGAAGTGTTCGTTGATACGATGAATGAACAACCTGCGGCAAAAAAGATGGTTGGCTTGGAACACATGCTAGAAAATGAAGTAAATGCTTTTGTGTTTCAGGACCTAGGAAGTGATTACTTGGACAATTTGTTGTCTTCCTTTTGA 807 0.4064 MGIHHATSDGILENVWAKIISSDRAKSSNSWEELPNLDGRDGSTDILQRLPSLGRWISMGADFWEEVLEGIVPYTSNTEDSSNNNLELGSASKSNNKVESGVRREKADAKHYRGVRRRPWGKYAAEIRDSSKKGARLWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLERVTNTFVCDNKGTDLAACASTTCDMYCHACSRIEKEESFFNSRKRRSRDVEVFVDTMNEQPAAKKMVGLEHMLENEVNAFVFQDLGSDYLDNLLSSF* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1483 268 CDD AP2 110 169 IPR001471 GO:0003700|GO:0006355
Apr1g1483 268 SMART rav1_2 111 175 IPR001471 GO:0003700|GO:0006355
Apr1g1483 268 ProSiteProfiles AP2/ERF domain profile. 111 169 IPR001471 GO:0003700|GO:0006355
Apr1g1483 268 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 13 268 - -
Apr1g1483 268 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 268 - -
Apr1g1483 268 Pfam AP2 domain 111 161 IPR001471 GO:0003700|GO:0006355
Apr1g1483 268 SUPERFAMILY DNA-binding domain 111 170 IPR016177 GO:0003677
Apr1g1483 268 MobiDBLite consensus disorder prediction 75 108 - -
Apr1g1483 268 Gene3D AP2/ERF domain 110 171 IPR036955 GO:0003700|GO:0006355
Apr1g1483 268 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Apr1g1483 268 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Apr1g1483 268 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1483 Apr-Chr1 24260177 24261314 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1483 11 268 AP2-EREBP Transcription Factor Family AT4G18450 36.039 2.73e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr1g1483 AP2 7.9e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1483 - - gmx:100820226 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1483 1 24260177 24261314 Apr1g1483 1 24260177 24261314 ECH