Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g1478 | ATGAACCAACGACATAAAATGATTCTTCTGCTGCTGTTTCTTTTTCAATTTCTTCTTGTAGCAGCTCAGACAGACAGTAGAGACTATGCTGGCCTAACATCTCTCACGCAATCCTGGACTAACAAACCAGCAAGTTGGGTGGGAACAGATCCTTGCGGCAGTAGTTGGGATGGGATTCGTTGCACCAATTCAAGAATTACACAATTGAAATTACCAGGCTTGAATTTGGGGGGCCAGCTTTCTTCGGCAATCCAGTCTTTGACTGAACTAGACACTGTGGATCTTTCTTACAACACGGGCTTGACAGGAACAATTCCACAAGAAATTGGGAATTTGAAAAAGCTAAAATCCCTAGCATTGGTTGGTTGTGGTTTCAATGGTCCTATTCCAGATTCAATTGGATCTTTAAAGCAGCTAAACTTTCTAGCACTGAATTCTAATAAGTTCAGTGGAAATATACCACGCGCTTTTGGCAATCTGTCAAATATTAATTGGCTTGATCTTGCTGAAAACCAACTTGAAGGGCCTATTCCTGTATCTGATAACCAAGGACGACTAGGACTTGACCTGCTCCTTAATGCCCAACACTTCCATATGGGGACCAATAAGCTCTCTGGTCAAATACCAGCAAAACTTTTTAACTCCAATATGAAACTGGAACATGCGCTTTTTGATGACAATCAACTAGAGGGTAGTATTCCTAGCACCATTACTCTTGTGAGCACATTGGAGGTGGTGCGCTTTGATAGGAACAAGTTAAGTGGGGCAGTGCCTTCTAATTTCAGCACACTTGGGAAACTTAGTGAGCTCTATTTAGCTCACAATAACCTGAATGGCTCTCTGCCGGATCTTAGTGGAATGAATAGTCTCACCTATGTGGATCTGAGCAACAATAGTTTCAGTTCTTCTACTATTCCTTCATGGGTTTCAAGTCTGCCAGTGCTGACAACAGCGATACTCGGGGACAACCAGCTCAGTGGCACATTAAACCTTAGCAATGGCTACAGCGACAGTCTGCAACTCATTAATTTGGAGGATAATCAAATAACCAATCTCCAGCCAAGTAATAAAATACCAAATTTTCAGCTAATACTAGCTAACAATCCAATTTGCCTTGAAAGTGGAGCTTCTCAAATAAGTTACTGCCAAGTGCCCCAAACCATTCCCTCATATTCAACACCAACAAATAATTGTGCACCTCCATCATGCAGTTCTAATCAGATTTTTAGCCCCAACTGTAAATGTGCATTTCCTTATACTGGAGTTCTGTCATCCAGAGCTCTTAGTTTCTCAAATTATAGCAACACAAGCTACTATAAGGATCTTGAGCAGACTCTGCTGAATGCTTTTCGTGCACAACATATTCCAGTGGATTCAGTTTCTCTTAGTAACCCCTTCAGAAATTCAACTTCTGATAATTTTCAGCTGACTTTAGATGTCTTCCCAGCTCAAAGTGATCGTTTCAATGCAACGGGAGTTTTAAGTATTGCTTTTATGCTTAGCAACCAAATTTACAAACCACCAGAATTTTTCTCCCCTTATGTCTTCAGGGGCAATAATTATGAATTCTATGGAGGAGAATCAAAAGGATCAAAGTCAAGCGGCACAGGAGTTATAGTTGGTGCAGTCATTGCTGCTTTGGTCTTCATTGTACTAGCTCTCTTTGCAGGAATATATGCCATCCGCCAAAAAAGAATAGCAAAAAGATCTGCAGAGTTGAACCCTTTTGTAAATTGGGAACAAAACAAGAATAGTGGCACTGCTCCTCAGTTGAAAGGATCACGATGGTTTTCTTTTGATGACCTAAAGAAATACACCAACAACTTCTCAGAAGCCAACACTATTGGATCTGGAGGCTATGGAAAGGTTTATCAAGGTGTTCTACCCTCTGGGGACTTGGTTGCTATCAAACGGGCTGCACAAGAATCTATGCAGGGTGCTGTTGAGTTTAAAACCGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTCGTTGGTCTTGTGGGTTTCTGTTTTGAGAAGGGTGAACAAATGTTGGTGTACGAGTACATTCCAAATGGCACTGTAATGGATAGTCTATCAGGAAAGTCTGGGATCTGGATGGATTGGGTACGGAGGCTGAAAGTAGCATTGGGTGCAGCCAGGGGTCTGGCCTATCTTCATGAACTTGCTAACCCACCAATCATACACAGGGACATAAAATCAAGCAATATCCTACTTGATAATCACCTCAATGCAAAAGTTGCAGATTTTGGTCTCTCCAAACTTCTTGTTGATAGTGAGAGGGGCCATGTTACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCGGAATACTACATGACTCAGCAGTTGACTGAAAAGAGTGATGTTTATAGCTTTGGAGTGCTAATGCTTGAACTAATAACAGCAAGAAGGCCTATAGAGCAAGGAAAGTATATTGTAAGAGAGATAAGGAGGGTAATGGACACATCAAAAGATTTATACAACCTTCATTCCATTCTAGATCCAACCGTAATAAAACAAACAAGACCAAAAGGTTTAGAAAAGTTTGTGATCTTGGCAATGAGGTGTGTCAAAGAATATGCTTCTGAGAGACCTACAATGGCTGAAGTTGTGAAAGAGATTGAGAACATAATCGAGCTTGTTGGATTGAACCCCAATGCTGAATCAGCTTCAGCATCAGAAACCTATGAGGAAGTGAGTGGAGGAAATGTTAAACATCCTTATGGCGACGAAGATTTTAGCTATAGTGGAATCTTTCCATCAACAAAGGTTGAACCTCAATAA | 2796 | 0.4102 | MNQRHKMILLLLFLFQFLLVAAQTDSRDYAGLTSLTQSWTNKPASWVGTDPCGSSWDGIRCTNSRITQLKLPGLNLGGQLSSAIQSLTELDTVDLSYNTGLTGTIPQEIGNLKKLKSLALVGCGFNGPIPDSIGSLKQLNFLALNSNKFSGNIPRAFGNLSNINWLDLAENQLEGPIPVSDNQGRLGLDLLLNAQHFHMGTNKLSGQIPAKLFNSNMKLEHALFDDNQLEGSIPSTITLVSTLEVVRFDRNKLSGAVPSNFSTLGKLSELYLAHNNLNGSLPDLSGMNSLTYVDLSNNSFSSSTIPSWVSSLPVLTTAILGDNQLSGTLNLSNGYSDSLQLINLEDNQITNLQPSNKIPNFQLILANNPICLESGASQISYCQVPQTIPSYSTPTNNCAPPSCSSNQIFSPNCKCAFPYTGVLSSRALSFSNYSNTSYYKDLEQTLLNAFRAQHIPVDSVSLSNPFRNSTSDNFQLTLDVFPAQSDRFNATGVLSIAFMLSNQIYKPPEFFSPYVFRGNNYEFYGGESKGSKSSGTGVIVGAVIAALVFIVLALFAGIYAIRQKRIAKRSAELNPFVNWEQNKNSGTAPQLKGSRWFSFDDLKKYTNNFSEANTIGSGGYGKVYQGVLPSGDLVAIKRAAQESMQGAVEFKTEIELLSRVHHKNLVGLVGFCFEKGEQMLVYEYIPNGTVMDSLSGKSGIWMDWVRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDNHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIEQGKYIVREIRRVMDTSKDLYNLHSILDPTVIKQTRPKGLEKFVILAMRCVKEYASERPTMAEVVKEIENIIELVGLNPNAESASASETYEEVSGGNVKHPYGDEDFSYSGIFPSTKVEPQ* | 932 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g1478 | 931 | PANTHER | RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED | 2 | 911 | - | - | |
Apr1g1478 | 931 | SUPERFAMILY | Protein kinase-like (PK-like) | 587 | 877 | IPR011009 | - | |
Apr1g1478 | 931 | CDD | STKc_IRAK | 615 | 881 | - | - | |
Apr1g1478 | 931 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 2 | 911 | - | - | |
Apr1g1478 | 931 | ProSitePatterns | Protein kinases ATP-binding region signature. | 615 | 637 | IPR017441 | GO:0005524 | |
Apr1g1478 | 931 | Gene3D | Transferase(Phosphotransferase) domain 1 | 685 | 897 | - | - | |
Apr1g1478 | 931 | SUPERFAMILY | L domain-like | 42 | 389 | - | - | |
Apr1g1478 | 931 | Gene3D | Ribonuclease Inhibitor | 185 | 411 | IPR032675 | - | |
Apr1g1478 | 931 | Pfam | Leucine rich repeat | 242 | 299 | IPR001611 | GO:0005515 | |
Apr1g1478 | 931 | Gene3D | Ribonuclease Inhibitor | 26 | 184 | IPR032675 | - | |
Apr1g1478 | 931 | Pfam | Protein kinase domain | 610 | 876 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g1478 | 931 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 729 | 741 | IPR008271 | GO:0004672|GO:0006468 | |
Apr1g1478 | 931 | Gene3D | Phosphorylase Kinase; domain 1 | 579 | 684 | - | - | |
Apr1g1478 | 931 | SMART | serkin_6 | 609 | 882 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g1478 | 931 | ProSiteProfiles | Protein kinase domain profile. | 609 | 882 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g1478 | 931 | ProSiteProfiles | Leucine-rich repeat profile. | 338 | 359 | IPR001611 | GO:0005515 | |
Apr1g1478 | 931 | ProSiteProfiles | Leucine-rich repeat profile. | 266 | 288 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g1478 | Apr-Chr1 | 24197848 | 24205955 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr1g1478 | 8 | 931 | Receptor kinase-like Gene Family | AT5G49760 | 52.681 | 0.0 | 949 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Apr1g1478 | Pkinase | 2.5e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g1478 | - | - | gmx:100786172 | 1477.23 |