Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1472 ATGAAGAAAATTTCCAAGAGCAGCTGCAAGTCAGCATCACACAGGCTCTTCAAGGACAAGGCAAGGAACCGTGTTGATGATTTGCAGGTGATGTTATTGGATCTGCAGTTTGCCAGGAAGGAAAGCCGTACAGTTGATGCTGCACTTCTTGAGGAGCAAGTCCATCAGATGCTTCGCGAATGGAAGGCCGAGCTCAATGAGCCATCTCCTGCTTCTTCTTTGCAGCAAGGAGGCAGTCTTGGATCATTCTCGACGGATATCTGTAGGCTATTGCAGCTATGTGAGGAGGAAGATGATGCCACTAGTTCATTAGTTGCACCTAAGCCTGAACCTAATGATCAGACTCTGCAGGCTGGGGCTAAGGTGATATTCCAACAGGGCCAACATCAACAGGATTTCCTATTACTTAATGAATGCAAACACTCCATTGTAGGAGTTCCCAATGTGGCAGCAAACAACTTGGATGGGCCTGCTTTCGAAAAGTTTCATCAATTTGATTTGAATAAGGACTTCAATCACAGCTTTTATGCTGGATTTAATGGTACAGGTTTTTGTGAGGAAGGTGTGGTTCCTCATATATATAGCTACCTGCCAAGTGTCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTTCACTTTGGGACTGTCCAAGGCCTGTTCAAGGGTTGAACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCTCTAGCTTTAAGGGAGGGACCACCAGGCATGGCCCCAGTTCTACGACCTGGGGGAATTGGACTGAAGGATAATTTACTTTTTGCTGCACTTGGTGCAAAGGCACAAGGAAAAGTTGTGGGCATTCCAGAATGTGAGGGAGCAGCAACTACAAAATCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCAGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCGCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAGAGGTCATTGCCGGATTATAGTGGGCGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTATATGGACCCGCAACCTCTGAACCATTTTGAGTGGCACCTATATGAGTATGAAATTAGCAAGTGTGATGCATGTGCCTTATATCGGTTGGAACTGAAGCTTGTTGATGGGAAGAAGAACTCCAAGGCAAAGATAACAGGTGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTTTCTGCCGAGTTTCAGTCTGATAACAAACGATCTATCAAAGCCAGAGCCAAACATAATGCCAATGGCATAGGTGGTGGTTATTCAGCTTCAAACAAAGAACAAGAAGACAAGGTAATTTTTTTCCCTTGTCGAGGCATTGTCAATAGCTCATTCTCACAGGAGTGCTGCATTAGAGGCGGCTGGTTAAGAGTTGTAACTTCCGAAGTACACCAACCCACAAAAAAATACCGTATACCCTTTGTTATCAGCATTTGGGTGAGTGCAAGAATCTAG 1521 0.4517 MKKISKSSCKSASHRLFKDKARNRVDDLQVMLLDLQFARKESRTVDAALLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSSLVAPKPEPNDQTLQAGAKVIFQQGQHQQDFLLLNECKHSIVGVPNVAANNLDGPAFEKFHQFDLNKDFNHSFYAGFNGTGFCEEGVVPHIYSYLPSVCPPPSAFLGPKCSLWDCPRPVQGLNWCQDYCSSFHAALALREGPPGMAPVLRPGGIGLKDNLLFAALGAKAQGKVVGIPECEGAATTKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKITGDSVADLQKQMGRLSAEFQSDNKRSIKARAKHNANGIGGGYSASNKEQEDKVIFFPCRGIVNSSFSQECCIRGGWLRVVTSEVHQPTKKYRIPFVISIWVSARI* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1472 506 PANTHER TRANSCRIPTION FACTOR VOZ1 1 449 IPR039277 GO:0006355|GO:0048578
Apr1g1472 506 PANTHER TRANSCRIPTION FACTOR VOZ1 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1472 Apr-Chr1 24161947 24165571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1472 3 433 VOZ-9 Transcription Factor Family AT1G28520 71.556 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Apr1g1472 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1472 - - gmx:100798565 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1472 1 24161947 24165571 Apr1g1472 1 24161947 24165571 ECH
Apr1g1472 1 24161947 24165571 Apr3g1005 3 24867443 24871223 ECH