Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1467 ATGGGGTTGATCGATCTCAACACCACTGAGGACGATGAAACTCCATCTTCTGCTTCTTCTTCTTCCTCTTCTTCTTCTTCTCACTCGGGGATAAGCACTTCTGTTTCAACCGTGGTTGTTCCTTCTCCTCCTTCTGTGTGTTTGGAACTGTGGCACGCCTGTGCAGGGCCTTTGATCTCTCTTCCGAAGAAAGGAAGCGTTGTTGTGTACTTGCCACAGGGACACTTTGAGCAAGTTCAGGATATTCCGGTCACTGCCTATAATATTCCACCCCATGTGTTCTGTCGTGTTCTTGATGTCAAGCTCCATGCAGAGGAAGGGAGCGATGAAGTGTATTGCCAAGTCATACTGGTTCCTGAAAGTGAGCAAGTTGAGCAAAGTTTGCGGGAAGGGGAAATTGATGCTGATGGGGAAGAGGACACTGAAACTATTGTAAAGTCAACAACACCCCATATGTTCTGCAAGACTCTCACAGCTTCAGACACTAGCACTCATGGTGGATTCTCGGTGCCACGTCGTGCAGCTGAAGATTGCTTTCCTCCCCTGGATTATAGTCAACAGAGACCTTCACAAGAGCTTGTGGCAAAGGATTTGCATGGATTAGAGTGGAGGTTTCGACATATATACAGGGGGCAACCACGGAGGCATTTGCTCACCACTGGGTGGAGTGCATTTGTGAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGCTGTTTCTTAGGGGTGATGATGGAGAACTGAGATTAGGGATACGTAGAGCAGCCCAATTGAAAAGTGCTGGTTCCTTTGGAGCTCCCTCTGGTCAGCAATTGAATCCTGCAAATCTCATGGATGTTGTTAATGCTTTATCTACAAGATGTGCATTTAGTGTTTGCTATAATCCAAGGGTCAGTTCCTCAGATTTCATCATACCTGTCCAAAGATTCTTAAAGAGCCTTGATTGTTCTTATTCAGCTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATGCTTCAGAGAGAAGATTCACTGGACTAATTGCTGGAATTAGTGATGTTGATCCTGTTAGATGGCCGGGATCAAAATGGAGATGCCTACTGGTAAGGTGGGATGACATAGAAGCAGCTAGGCATAATAGGGTTTCTCCGTGGGAAATTGAGCCTTCTGGTTCTGCTTCCACTTGCAGTAACTTGATGGCAGCTGGTTTGAAGAGGACCAGGATTGGATTGACTTCAGCAAAGCTGGAATTTCCTGCTTCCAATGGGATTGGAACATCAGGCTTTGGGGAATCATTAAGGTTCCGGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATACTCCATTTGATTGTGTTAATGCTCAGAGTCCCAGGTTATATGAGTTAGGGAGGTGCTATCCTGGTTCAAACAGTTCTGGGATTCCTGCTACAGGAAATAATGTCAGAATGCCGCATGTGACATCTGATTTTTCCTGCAATGGCATAGGCTTTAGTGAATCTTTGCGATTCCAAAAGGTCTTGCAAGGTCAAGAAATTCTTCCAAGCCAACCATATGGCAGAGCTTTGTCAATTGAGGAGGCTCATGGAAATGGTCGTTTTGGACTTTTTGATGGTTATCAATTGCTTAGCTCTAGAAATGGATGGTCTGCCCAGGTGCATGATAATGCTTCACATTTGCATGCATCTGTTACAACTGGACAGGTGTCATCTCCCTCATCTGTGTTGATGTTCCAGCAAGCAGTTAACCCAATTTCAAACTGCGATTATAACAAAAAACGCAATCAAGAAAGGTACCAAGGTTCATACACACCAGAAGTGAAAGGTAGAACATTTGCATCTTCCCCACCTGGGGATACTATTTTCCCAAGGCGAGCACAGGAAGGCACAAATTCTTTTGGTATGTTAAATGTTCATAATCAGTTGGCTGGTTCACGGTTACATGAGTCAGTATCAGCACTGAGAAGCAGCCAAGAGTTGGTTTCCTCGTGTAAAAGTAGCTGCAGACTCTTTGGTTTTTCATTGACTGAGAACCCACACATTGCAAACAAAGAGGCTGATGCCACATCTACCATCACTTGTCCATTGAATTCTGGACCGTCCTTTACTCGGCTTGTTGAGGATGAGTTCCACCCTGGCCACTCGCACCGGAGTAAGGCAGTTGGAAGTAACTGTGCCAAAGTAAGTGATATATGTATCCTATCCTTGAACATGCAGGAAGTAGTTATCACATCGTTCACACTGATTTTTGATATCTTTGCAGGGTGTATTGCAGTATTGATCTGA 2268 0.4475 MGLIDLNTTEDDETPSSASSSSSSSSSHSGISTSVSTVVVPSPPSVCLELWHACAGPLISLPKKGSVVVYLPQGHFEQVQDIPVTAYNIPPHVFCRVLDVKLHAEEGSDEVYCQVILVPESEQVEQSLREGEIDADGEEDTETIVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFGAPSGQQLNPANLMDVVNALSTRCAFSVCYNPRVSSSDFIIPVQRFLKSLDCSYSAGMRFRMRFETEDASERRFTGLIAGISDVDPVRWPGSKWRCLLVRWDDIEAARHNRVSPWEIEPSGSASTCSNLMAAGLKRTRIGLTSAKLEFPASNGIGTSGFGESLRFRKVLQGQEILGVNTPFDCVNAQSPRLYELGRCYPGSNSSGIPATGNNVRMPHVTSDFSCNGIGFSESLRFQKVLQGQEILPSQPYGRALSIEEAHGNGRFGLFDGYQLLSSRNGWSAQVHDNASHLHASVTTGQVSSPSSVLMFQQAVNPISNCDYNKKRNQERYQGSYTPEVKGRTFASSPPGDTIFPRRAQEGTNSFGMLNVHNQLAGSRLHESVSALRSSQELVSSCKSSCRLFGFSLTENPHIANKEADATSTITCPLNSGPSFTRLVEDEFHPGHSHRSKAVGSNCAKVSDICILSLNMQEVVITSFTLIFDIFAGCIAVLI* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1467 755 Gene3D - 316 390 - -
Apr1g1467 755 CDD B3_DNA 151 253 IPR003340 GO:0003677
Apr1g1467 755 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Apr1g1467 755 SMART B3_2 153 255 IPR003340 GO:0003677
Apr1g1467 755 MobiDBLite consensus disorder prediction 9 34 - -
Apr1g1467 755 SUPERFAMILY DNA-binding pseudobarrel domain 145 259 IPR015300 -
Apr1g1467 755 Pfam Auxin response factor 280 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Apr1g1467 755 PANTHER AUXIN RESPONSE FACTOR 38 722 - -
Apr1g1467 755 Gene3D - 151 255 IPR015300 -
Apr1g1467 755 Pfam B3 DNA binding domain 153 254 IPR003340 GO:0003677
Apr1g1467 755 MobiDBLite consensus disorder prediction 1 34 - -
Apr1g1467 755 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 38 722 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1467 Apr-Chr1 24111824 24118011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1467 152 510 B3 DNA Binding Superfamily AT2G33860 60.221 1.01e-143 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Apr1g1467 B3 3.7e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1467 K14486 - gmx:100789906 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1467 1 24111824 24118011 Apr1g1467 1 24111824 24118011 ECH