Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1463 ATGACATGGTGCAATAATGACTCTGATGAGGAGAGGGGAATGGAATCAATCACGCCAATTATTACTCGTGACACTGTTGTTACTGACATAAAACTCACCGAAGAAATTCGAACTATAACATGTCCCTCATGCGGCCATAACATTGAATTCAAAGATCAGGGTGGAATTCATGACTTGCCGGGGTTACCAGCTGGAGTGAAGTTTGATCCGAATGACCAAGAAATAATAGAACATTTGGAGGCAAAAGTGGCATCTGATGTGTGCAAGCTTCATCCCCTAATTGATGAGTTCATACCAACGCTTGAAGGCGAGAATGGGATTTGTTATACACACCCAGAAAAGCTACCAGGAGTTAGCAAAGATGGACAGATACGGCACTTCTTTCATAGGCCTTCAAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGATGAAGGAAGTGAAACAAGATGGCACAAAACGGGAAAAACGAGAGCAGTTTTTGCAGCTGGTGGTGCAGTAAAAGGTTTTAAAAAAATACTAGTACTCTACACCAACTATGGTAGGCAAAAGAAGCCTGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGCAGTAATGAAGAAGAGAAAGATGGAGAACTAGTTGTTTCAAAGGTATTCTACCAGACACAACCTAGACAATGTGGTAATTCCATCATAATAAGGGATCCTTACGAAAAAATATTGAATGATGGAAATGACCACGACAACAATACAACACCAACACCTAAAAATGCAAGTCTTGTTGACTGCTACAGTGCTCCTTACATAAATTATGATAATGTCCATGTGGGTCATAATAGAGAAAGCTGCCCACAACTAGTTATTCCAAACTCGGTTGTCCAAGTTGATGGCCCCTTTTTTCGCTTAGCAATGGATCCAAACAAAGCAAGATTGGAAAGTAACACTGAGAAGAGCTTCTTGTTAGAGTAG 972 0.4053 MTWCNNDSDEERGMESITPIITRDTVVTDIKLTEEIRTITCPSCGHNIEFKDQGGIHDLPGLPAGVKFDPNDQEIIEHLEAKVASDVCKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAAGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGNSIIIRDPYEKILNDGNDHDNNTTPTPKNASLVDCYSAPYINYDNVHVGHNRESCPQLVIPNSVVQVDGPFFRLAMDPNKARLESNTEKSFLLE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1463 323 MobiDBLite consensus disorder prediction 135 154 - -
Apr1g1463 323 Gene3D NAC domain 71 226 IPR036093 GO:0003677|GO:0006355
Apr1g1463 323 ProSiteProfiles NAC domain profile. 62 222 IPR003441 GO:0003677|GO:0006355
Apr1g1463 323 Pfam No apical meristem (NAM) protein 63 203 IPR003441 GO:0003677|GO:0006355
Apr1g1463 323 SUPERFAMILY NAC domain 56 222 IPR036093 GO:0003677|GO:0006355
Apr1g1463 323 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 297 - -
Apr1g1463 323 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 297 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1463 Apr-Chr1 24060128 24064663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1463 1 232 NAC Transcription Factor Family AT4G28500 72.532 4.05e-121 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr1g1463 NAM 3.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1463 - - gmx:100809389 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1463 1 24060128 24064663 Apr1g1463 1 24060128 24064663 ECH
Apr1g1463 1 24060128 24064663 Apr3g1019 3 24971525 24974574 ECH