Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1462 ATGAACCATGTTGCCCATATTGCTTATGATTTGGTCATGATCACTCTATCCATATCTCTCATCGTTCTTGGCGTTATTCTCTTTCTTGCTTGCAAGAAGAAACCGGTTGAATCAGAAGAAACACTTCCTGTGAAGCTTTGTGCTCGGGCATACCCTTTGATGGAAATTGATGCTGCCACTGATGGCTTCAATCATAGGAGAATTGTGGGTAAGGGTCGCTTAGGAACTGTGTATGCTGGGACACTTGAGAAAGAAGAACTTGTAGCCGTGAAGAGGATTCACCCAGTTCTTGTGTTGAGCAATGCAGGGTTTGGATTCTCATCCGTGTTAAAATGGCTCTCTTTAGCTCAACACCCCAACGTTGTTCCAATTATAGGATTCTCAGAAGCACCGGGTGAGAGAGTTATATTGATGGAGTTTGTGCGCATGGCAAGCTTGGATTTTTACTTGCATCAAAACCCAGATGGGGCCTCACTTTTGGACTGGAACAAGAGGTTGAGGATTGCAGCTGGAGCAGCTAGAGGGCTTCAATACCTGCATGAAGTGGTGGCACCAAACATTGTACACGGGTGTGTTAAGTCCTCTAATATTCTTATTGATGTAAATTTTTGTGCTAGAATTTCCGATTACGGGCTTAACTTTTTGGCACCTGTGGAAAAGAGAGGGCTAGTGGGTTATGTAGATGATGAGTATTGGAATGAAAGGAGGAGTGGTGGAGCTACCAAGGAAAGTGATATTTATGGGTTAGGGGTGGTCTTGTTGGAGCTTTTGAGTGGGAGAGGGTGTGAGGGAGGATTGTTGGTGAAGTGGGCTTTGCCTTTGATCAAGGATTTGAATTTTAGTGAACTTTTGGATCCTAGATTGGTCATTCCTTCTGACATGAAGCCTCTTGTTAGATTAGCCAAAGTTGCTTCAGCTTGTGTTGGCAATTCACGGAAATGTAGGCCTTGCGTGGCTCAAGTGGCAACCATTTTGAGCAATTTAGAAACGGAAGTGTGTCTCTAA 1005 0.4408 MNHVAHIAYDLVMITLSISLIVLGVILFLACKKKPVESEETLPVKLCARAYPLMEIDAATDGFNHRRIVGKGRLGTVYAGTLEKEELVAVKRIHPVLVLSNAGFGFSSVLKWLSLAQHPNVVPIIGFSEAPGERVILMEFVRMASLDFYLHQNPDGASLLDWNKRLRIAAGAARGLQYLHEVVAPNIVHGCVKSSNILIDVNFCARISDYGLNFLAPVEKRGLVGYVDDEYWNERRSGGATKESDIYGLGVVLLELLSGRGCEGGLLVKWALPLIKDLNFSELLDPRLVIPSDMKPLVRLAKVASACVGNSRKCRPCVAQVATILSNLETEVCL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1462 334 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 1 333 - -
Apr1g1462 334 ProSiteProfiles Protein kinase domain profile. 63 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1462 334 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 333 - -
Apr1g1462 334 Gene3D Phosphorylase Kinase; domain 1 29 140 - -
Apr1g1462 334 Pfam Protein tyrosine and serine/threonine kinase 66 323 IPR001245 GO:0004672|GO:0006468
Apr1g1462 334 Gene3D Transferase(Phosphotransferase) domain 1 142 332 - -
Apr1g1462 334 SUPERFAMILY Protein kinase-like (PK-like) 40 325 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1462 Apr-Chr1 24048133 24050022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1462 48 325 Receptor kinase-like Gene Family AT3G59420 40.411 4.98e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Apr1g1462 PK_Tyr_Ser-Thr 3.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1462 - - vun:114187437 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1462 1 24048133 24050022 Apr1g1462 1 24048133 24050022 ECH
Apr3g1760 3 33389212 33391285 Apr1g1462 1 24048133 24050022 PCT