Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1427 ATGGTAGGAACCTTCGAAGTCGGAGCCGTCCCTTTCAACCCCGACGGTTGGGGTCCACCAGATACCGCTTCCGGTACCACCACCAACCTCCCACTCAACGTTCCTTTCGCACCCTTCTCCCGCTCCGACAAAGTGGGCCGAATCGCCGATTGGACCCGCAACTTCAATAACCCGGCTCGCCCAAAGAACCCGGCCGATTCCGTCTTCGACTTCACAAACGACGACTCGTTCCCTGCTTCGGCCGACGACGACTCGTCGTTCCGCTTGGTCGACGGCAAGCCCCCTCCGCGTCCCAAATTCGGACCTAAATGGCGATTCCAACAACAACGACAACTCCCTCAGCGTCGTGACGAAGAGGTGGAAGCGCGAAAACGCGAAGCGGAGAAGGAAAGAGCACGCCGCGACCGACTCTACCACCTTAACCGATCAAACCCTAACGCTCCTCGGCGTGAAGCTGCAGTTTTCAAATCCTCTGTGGATATCCAACCCGAATGGAACATGCACGACCAGATCCCCTTCTCCACCTTCTCGAAGCTCTCCTTCAGCGTTCCCGAACCCGAAGACCTTCTCCTCTGCGGCGCTCTTGAGTACTACGACCGATCCTACGATCGCATCACTCCCAAGAACGAACGCAGACTGGAGAGGTTCAAGAATCGGAACTTCTTCAAGGTTACCACCACCGATGACCCTGTTATTCGCAGGCTCGCTAACGAGGACAAAGCCACTGTTTTCGCCACTGATACTATTCTCTCCACTCTCATGTGTGCTCCCAGGTCTGTTTACTCTTGGGATATCGTTGTTCAGCGCGTTGGGAACAAGTTGTTCTTCGATAAGAGAGATGGATCTCAGCTTGATTTGCTTTCTGTTCATGAGACCTCGCAGGAGCCACTTCCTGAGGCTAAAGATGATATTAACTCTGCTCATTCGCTTAGTGTTGAGGCTGCATATATTAATCAGAATTTCTCTCAGCAGGTGTTGATTAGGGATGGGAATAAGGTTACTTTTGATGAGCCTAACCCATTTGCTAATGAAGGTGAAGAGGTTGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCGAGGTGTGAGGTTCATAGTGTTGTTGATGTTAACAAGCAGAGGTCTTTCCTTACTTTGAATGCGTTGAACGAGTTTGATCCCAAGTATTCGGGTGTTGATTGGCGGCAAAAGTTGGAGACGCAGAGGGGTGCTGTGTTGGCTACTGAGCTTAAGAACAATGCTAACAAGTTGGCTAAATGGACTGCTCAGGCTCTGTTGGCGAGTGCGGATATGATGAAGTTGGGATATGTGTCGAGGATTCATCCCCGTGATCATTTTAACCATGTCATTTTGGCTGTGGTTGGATATAAGCCAAGGGACTTTGCAACACAGATTAATTTGAACACGTCGAATATGTGGGGGATTGTGAAGTCTATTGTGGACTTGTGCATGAAATTGAATGAGGGAAAGTATGTTCTTGTGAAGGATCCATCGAAGCCCCAGGTTAGGATTTATGAGGTTCCCGCTGATGCATTTGAAAATGACTACGTGGAGGAGCCACTTCCGGAAGAGGAACAAGTTCAACCTCCGGCAGAAGGTGCTGAGGGTGGAGAGGCAGCTGCTACCACTAATGCTGTGGAAGATAAGCAGATAGATGATCAAGCCTAA 1692 0.5006 MVGTFEVGAVPFNPDGWGPPDTASGTTTNLPLNVPFAPFSRSDKVGRIADWTRNFNNPARPKNPADSVFDFTNDDSFPASADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYHLNRSNPNAPRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFSVPEPEDLLLCGALEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFATQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQVQPPAEGAEGGEAAATTNAVEDKQIDDQA* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1427 563 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 5 548 - -
Apr1g1427 563 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 6 514 IPR007783 GO:0003743|GO:0005737|GO:0005852
Apr1g1427 563 MobiDBLite consensus disorder prediction 53 133 - -
Apr1g1427 563 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 5 548 IPR007783 GO:0003743|GO:0005737|GO:0005852
Apr1g1427 563 MobiDBLite consensus disorder prediction 110 133 - -
Apr1g1427 563 Coils Coil 115 135 - -
Apr1g1427 563 MobiDBLite consensus disorder prediction 524 563 - -
Apr1g1427 563 PIRSF Transl_init_eIF3d 1 544 IPR007783 GO:0003743|GO:0005737|GO:0005852
Apr1g1427 563 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 526 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1427 4 561 Eukaryotic Initiation Factors Gene Family AT4G20980 78.253 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1427 K03251 - gmx:100799613 999.579