Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1422 ATGATCAGACACAAGCACACTTACCCTCTTCTACCATTCCTTCTTTCAATTCTCTTCCTTTTCGACCCAACATCTGCCATAGATTTTGTCTTCAACGGATTCAACTCCTCTCACGTGTCCCTCTTTGGCAATGCCACCATCGATTCACGAATTCTTACCCTCACCCATCACCAAACTTTCTCTATTGGTCGTGCCCTGTTTCGTGAAAAAATTCCCACAAAGCAACCAAAATCTTCCTACGTGTACCCTTTTTCCACCTCTTTCATCTTTTCCATGGCACCTTTCAAAGACATTCTTCCAGGGCATGGCTTAGTTTTCATCTTCACTCCAGTGACAGGCATCAATGGCACAAGTTCTGCTCAACACCTTGGTCTCTTTAACCTCACCAACAATGGAAATGCCAGCAACCATGTGTTTGGTGTTGAGTTTGATGTGTTCATGAACCAAGAGTTTGATGACATCAACGCCAACCATGTTGGGATTGACATAAACTCTCTCAAGTCCTATGTTTCCCATGATGCTGGGTATTGGAAAAACCAAGGTGACAAGTCTTTTCAGGAGTTGTCACTTAACAGTGGTGAAAATTACCAAGTTTGGATCGACTATGAAGATTCCTTGATCAATGTTACCATGGCACCGGTGGGTATGAAAAGGCCTAGTAGACCTTTATTGAATGTTTCTGTTAACTTGTCTCAAGTTTTCGAAGATGAAATGTTTGTTGGGTTTACTAGTGCTACTGGTCAATTAGTAGAAAGCCACAAGATTTTGGGTTGGAGTTTTAGCAATAAGAATTTTTCATTGAGTGATGAGCTTGTTACTATTGGGTTACCCTCTTTTGTTCTTCCAAAAGATTCAATTTTTCACTCAAAGGGGTTTGTTGCAGGATTTACAATTGGAGTTTTTTTGGTTGTTTGTTTCTTGGTTTTGTTGGCACTGTTTTTTATCCAAAGGAATCGAAGGAGAGCAAGGAAGAGAGAGGAAAAGGAGGAATGGGAATTGGAGTATTGGCCACACAGAATGGCATATGAAGAAATAGAGGCAGCAACAAAAAGGTTCTCTGAGGAAAATGTGATTGGGGTTGGTGGAAATGGGAAGGTTTACAAGGGTGTTTTAAGAGGAGGTGTAGAGATTGCTGTGAAGCACATTTCTCATGAAAATGATGGTATGCGAGAATTTCTTGCAGAAATTTCAAGTCTTGGAAGATTGAAGCAGAGAAATTTGGTGGGGTTGAGAGGATGGTGCAAAAAAGATGTTGGGAATTTCTTGTTAGTTTATGACTATATGGAAAATGGGAGCTTAGACAAGAGGGTATTTGATTGTGATGAGAGGAAGATGTTAAGTTATGAAAATAGAATAAAGATTATCAAAGATGTGGCTTTTGCGGTTTTGTATTTGCACGAGGGGTGGGAAGCCAAAGTAGTGCATAGGGACATCAAGGCCAGCAATGTCTCATTGGATAAGGATATGAATGGAAGGCTTGGAGATTTTGGGTTAGCCAGAATGCAAAGCCACGGTCAAGTTGCTAGCACCACCAAATTGGTTGGAACAGTGGGATACATGGCTCCTGAAGTGATTAGGACTGGAACAGCTTCCACTCAAACAGATGTTTACATGTTTGGGATCTTGATTTTAGAGGTCATGTGTGGAAGGAGACCTTTAGTAGAAGGTAAGCCACCTTTGGTAGAGTGGGTTTGGAACCTAATGGTACAAGGGCAGCTTGTGTGTGCACTTGATGAAAGACTAAGGGCTAAAGGAAAGTTTAATGTGCAAGAAATGGAGAGGGTACTACACTTGGGTTTGTTGTGTGCTTATCCTGAACCAAAGGCTAGGCCAACAATGAGACAAGTGGTGAATGTTTTAGAGGGGAACAATGAAGGAAAGGAATCAGAAATTGAGAATATGGATACATATTTGCTTCAACAGTTGAAATCAAGGGATTTTTTGTCTCAGTATTCTCAGTATTTTAGCTTTGCATCGCACCCTACTTTTCAAGATATTCGTCACTCTTCCTCAATGTCTCTCACTTCGTCCACATCTCTTGTTGAGGGTCGGTGA 2055 0.4112 MIRHKHTYPLLPFLLSILFLFDPTSAIDFVFNGFNSSHVSLFGNATIDSRILTLTHHQTFSIGRALFREKIPTKQPKSSYVYPFSTSFIFSMAPFKDILPGHGLVFIFTPVTGINGTSSAQHLGLFNLTNNGNASNHVFGVEFDVFMNQEFDDINANHVGIDINSLKSYVSHDAGYWKNQGDKSFQELSLNSGENYQVWIDYEDSLINVTMAPVGMKRPSRPLLNVSVNLSQVFEDEMFVGFTSATGQLVESHKILGWSFSNKNFSLSDELVTIGLPSFVLPKDSIFHSKGFVAGFTIGVFLVVCFLVLLALFFIQRNRRRARKREEKEEWELEYWPHRMAYEEIEAATKRFSEENVIGVGGNGKVYKGVLRGGVEIAVKHISHENDGMREFLAEISSLGRLKQRNLVGLRGWCKKDVGNFLLVYDYMENGSLDKRVFDCDERKMLSYENRIKIIKDVAFAVLYLHEGWEAKVVHRDIKASNVSLDKDMNGRLGDFGLARMQSHGQVASTTKLVGTVGYMAPEVIRTGTASTQTDVYMFGILILEVMCGRRPLVEGKPPLVEWVWNLMVQGQLVCALDERLRAKGKFNVQEMERVLHLGLLCAYPEPKARPTMRQVVNVLEGNNEGKESEIENMDTYLLQQLKSRDFLSQYSQYFSFASHPTFQDIRHSSSMSLTSSTSLVEGR* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1422 684 PANTHER - 11 676 - -
Apr1g1422 684 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 11 676 - -
Apr1g1422 684 Gene3D Phosphorylase Kinase; domain 1 314 427 - -
Apr1g1422 684 Gene3D Transferase(Phosphotransferase) domain 1 428 645 - -
Apr1g1422 684 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Apr1g1422 684 Pfam Protein kinase domain 353 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1422 684 SUPERFAMILY Protein kinase-like (PK-like) 330 621 IPR011009 -
Apr1g1422 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 270 IPR013320 -
Apr1g1422 684 SMART serkin_6 352 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1422 684 Gene3D - 25 271 - -
Apr1g1422 684 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Apr1g1422 684 ProSiteProfiles Protein kinase domain profile. 352 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1422 684 Pfam Legume lectin domain 27 264 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1422 Apr-Chr1 23460971 23464371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1422 22 568 Receptor kinase-like Gene Family AT4G04960 66.786 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr1g1422 Pkinase 9.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1422 - - gmx:100804391 1167.91